| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2407 |
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| Symbol | |
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| ID | 3961234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2649128 |
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| End bp | 2650666 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917225 |
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| Product | citrate lyase, alpha subunit |
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| Protein accession | YP_523655 |
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| Protein GI | 89901184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3051] Citrate lyase, alpha subunit |
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| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0227211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGG AACTTATCAA AGATCAGCTC GCGCTGTTCC AATCCAACCC GACCCTCAAG
GGCTTGAAGC CATTTGAGAG CTTTTGCGCC GGTGCGCCAT ACCTCAAGGA CTTACAACAA
AAGTTGGGCC GCAAGATGGT CCAGACCCTG GAGGAGGCAG TGCAGCGGAC CGGACTCAAG
GACGGCATGA CGATCTCGTT TCATCACGGG TACCGCGAGG GCGACCGCAC CATCAATCAA
GTGGTGCAAC TGCTCGCCAG CATGGGTTTC AAGAACCTCA CACTGGCCGC ATCGTCGCTG
ATGTCGTGCA ACACTCCTTT GATTGAACAC ATTCGAAGCG GCGTGATCCG GCGCATCTAC
ACCTCGGGCA TGCGCGGCAA ACTGGCAGAA GCGATATCGA ACGGATTGAT GGAGGAACCG
GTCCACATTC ACTCGCATGG CGGGCGAGTG CACCTGATTC AGAGTGGTGA AATCGCGATT
GACGTCGCCT TTCTTGGCGT TTCAGCCTGT GACGAATTTG GCAACGCCAA CGGGGTCAGC
GGAAGATCGC GCTGCGGCTC ACTGGGTTAT GCCAAGGTTG ATGCCAAGTT CGCCCGCAAT
GTCATCATGC TGACGGAGGA GTTCCTACCC TTTCCGAATA CGCCGGTCAG CATCTCCCAG
GACCAGGTCG ATTTCATTGT CAAGGTCAAT GAGGTGGGTG ATCCATCCAA GATCAGTGTT
GGTGCGGCCC GTGTCACAAG CGATCCGCGC GAGCTGTTGA TCGCCCGCTT TGCGGCCGAC
GTGATTGAGC ATTCCGGGTA TTTCAAGGAC GGTTTCTCGG TTCAGACCGG TTCCGGCGCA
TCGTCGACCG CGGCGACACG GTTCATGGAA CACCGCATGC GCAAGAAGGA CGTCAAGGCG
GCGTTTGCCT TGGGTGGCAT CAGTGGCGGC ATCGTCGAAC TTCACAAAAA GGGTTTGATC
GCGAAGCTCA TCGACACCCA GAGTTTCGAC GCTGATGCAA CGGAGTCGCT GCGGACTTCG
CCTAGCCACT TCGAAGTTTC GACCAACGAA TACGCCAATC CGAGTTCCAA GGGGACCTAC
TGTGACCGCG TGGACGTGGT GATCCTGAGC GCACTGGAAA TCGACATCAA CTTCAACGTC
AACGTGCTCA CCGGTTCAGA CGGTGTGATG CGGGGCGCTT CGGGCGGTCA TTGTGACGTG
GCGGCGGCGG CCAATCTTGC CATTGTCGTC TGCCCGCTGA TTCGCAGCCG CATCCCGACC
GTCGTCAACA AGGTCACCAC CATCGTCACT CCGGGTGAAT GTATTGGCGT GCTCGTCACC
GACCATGGCA TTGCCGTCAA CCCCAGGCGC CCGGAAGTTG AGCAGCGACT GAAGGACGCC
GGCTTGCCCG TCATGAGTAT TGCGCAGCTT TATGCACGCG CGCTTGAAAT CAGCGGCCGG
CCTTCGCCCA TCGAGTTCCT TGACAAGATC GTCGGCATCG TGCGCTACCG GGACGGAAGC
GTGATTGATG TGGTGCGGCA AATCAAACCC ATGGACTGA
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| Protein sequence | MNQELIKDQL ALFQSNPTLK GLKPFESFCA GAPYLKDLQQ KLGRKMVQTL EEAVQRTGLK
DGMTISFHHG YREGDRTINQ VVQLLASMGF KNLTLAASSL MSCNTPLIEH IRSGVIRRIY
TSGMRGKLAE AISNGLMEEP VHIHSHGGRV HLIQSGEIAI DVAFLGVSAC DEFGNANGVS
GRSRCGSLGY AKVDAKFARN VIMLTEEFLP FPNTPVSISQ DQVDFIVKVN EVGDPSKISV
GAARVTSDPR ELLIARFAAD VIEHSGYFKD GFSVQTGSGA SSTAATRFME HRMRKKDVKA
AFALGGISGG IVELHKKGLI AKLIDTQSFD ADATESLRTS PSHFEVSTNE YANPSSKGTY
CDRVDVVILS ALEIDINFNV NVLTGSDGVM RGASGGHCDV AAAANLAIVV CPLIRSRIPT
VVNKVTTIVT PGECIGVLVT DHGIAVNPRR PEVEQRLKDA GLPVMSIAQL YARALEISGR
PSPIEFLDKI VGIVRYRDGS VIDVVRQIKP MD
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