Gene Rfer_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2391 
Symbol 
ID3962061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2633597 
End bp2634832 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content56% 
IMG OID637917209 
Productextracellular ligand-binding receptor 
Protein accessionYP_523639 
Protein GI89901168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0276546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG TAATGAACCT GGTTGCAGCC ACAGCTGCAC TATTGTGTGC CGGCGGCGCA 
CTTGCCCAGA AAGGTGAGAC GGTCAAAATT GCCATGATCG AGGGCCTGTC CGGGCCGATG
GCCAACGTGG GCCAGAACCA GTTGAAGAAC TGGCAATTTC TGGCCGACCC AGCCAACGGC
GTCAGGAACC CGGCAGGTGT GAAGTTCGAA ATAGTCGGCA TGGACAGCAA AGGGTCGCCA
CAAGAAGCAC TCAACACCTT CAAAGCAGCG GTCGACCAGG GCTTTCGCTA CATCGCGCAG
GGAAACGGGT CCGGCGCGGC GCTGGCCTTG TCCGACGCAG TCGCGAAGCA CAACGAGCGC
AACCCCGGCA AGGAAGTGGT CTACCTGAAT TATTCGGCGG TGGATCCGGC GTTGACCAAC
GAGAAATGCA ATTATTGGCA TTTCCGGCTG GATGCAGACA CGTCGCAGAA GATGGAAGCA
TTGACCAGCT TCATGAAAGA CAAGCCCGAA GTCAAAAAAG TGTACTTGCT CAACCAGAAT
TACTCACACG GCCAACAGGT CAGCAAGTAT TTCAAGGAAG GTATGGCCCG CAAGCGGCCC
GATGCCCAGA TGGTCGGCGA TGATCTGGTG CCAATGGGGC AGGTCAAGGA TTTTTCGCCC
TATGTCGCCA AGATCAAGGC ATCGGGTGCC GACACCATCG TGACCGGCAA TTGGGGGCAG
GACCTGACGC TGTTCGTCAA GGCATTGAAC GACTCCGGCC TCAAGCTGCC GATGTATACC
TACTATGCCG GCGTGTCGGG CACACCCACC GCGCTGGCCG CAGGCGGTGA GGGCGAGGTT
TATCAGATTG CGTACAACCA TTCCAATTAC ATGGGGGTCA TGGGGAAACT GACGAACGAC
TTCCAGAAGA AGTTTGGCGA CGACTTCTAC ACTTTCTCCA TCTACAACGG CCTCGTGCTT
TTGAGTGAAG GCATGGCCAA GGCAAAGTCC ACCGACCCGG TCAAGGTGGC CGCCGCGATG
GAAGGGTTGA AGTTCCAGGG CTTCAACGGA GATTCCGAGA TGCGCAAATC AGATCACCAG
ATGCAGCAGG GCTTGTACAT CTCCAAATGG CAAAAAGTGG ACAAGAAGAA CCCCTATAGT
GCAGAAAAAA CCGGCTACAC CTTTGCGCCG GTCAAATACA TTGAGGCGTA TGTGGCCAGC
ACACCCACCA GTTGCCAGAT GAAACGCCCA GGCTAA
 
Protein sequence
MKFVMNLVAA TAALLCAGGA LAQKGETVKI AMIEGLSGPM ANVGQNQLKN WQFLADPANG 
VRNPAGVKFE IVGMDSKGSP QEALNTFKAA VDQGFRYIAQ GNGSGAALAL SDAVAKHNER
NPGKEVVYLN YSAVDPALTN EKCNYWHFRL DADTSQKMEA LTSFMKDKPE VKKVYLLNQN
YSHGQQVSKY FKEGMARKRP DAQMVGDDLV PMGQVKDFSP YVAKIKASGA DTIVTGNWGQ
DLTLFVKALN DSGLKLPMYT YYAGVSGTPT ALAAGGEGEV YQIAYNHSNY MGVMGKLTND
FQKKFGDDFY TFSIYNGLVL LSEGMAKAKS TDPVKVAAAM EGLKFQGFNG DSEMRKSDHQ
MQQGLYISKW QKVDKKNPYS AEKTGYTFAP VKYIEAYVAS TPTSCQMKRP G