Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2391 |
Symbol | |
ID | 3962061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2633597 |
End bp | 2634832 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917209 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_523639 |
Protein GI | 89901168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0276546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG TAATGAACCT GGTTGCAGCC ACAGCTGCAC TATTGTGTGC CGGCGGCGCA CTTGCCCAGA AAGGTGAGAC GGTCAAAATT GCCATGATCG AGGGCCTGTC CGGGCCGATG GCCAACGTGG GCCAGAACCA GTTGAAGAAC TGGCAATTTC TGGCCGACCC AGCCAACGGC GTCAGGAACC CGGCAGGTGT GAAGTTCGAA ATAGTCGGCA TGGACAGCAA AGGGTCGCCA CAAGAAGCAC TCAACACCTT CAAAGCAGCG GTCGACCAGG GCTTTCGCTA CATCGCGCAG GGAAACGGGT CCGGCGCGGC GCTGGCCTTG TCCGACGCAG TCGCGAAGCA CAACGAGCGC AACCCCGGCA AGGAAGTGGT CTACCTGAAT TATTCGGCGG TGGATCCGGC GTTGACCAAC GAGAAATGCA ATTATTGGCA TTTCCGGCTG GATGCAGACA CGTCGCAGAA GATGGAAGCA TTGACCAGCT TCATGAAAGA CAAGCCCGAA GTCAAAAAAG TGTACTTGCT CAACCAGAAT TACTCACACG GCCAACAGGT CAGCAAGTAT TTCAAGGAAG GTATGGCCCG CAAGCGGCCC GATGCCCAGA TGGTCGGCGA TGATCTGGTG CCAATGGGGC AGGTCAAGGA TTTTTCGCCC TATGTCGCCA AGATCAAGGC ATCGGGTGCC GACACCATCG TGACCGGCAA TTGGGGGCAG GACCTGACGC TGTTCGTCAA GGCATTGAAC GACTCCGGCC TCAAGCTGCC GATGTATACC TACTATGCCG GCGTGTCGGG CACACCCACC GCGCTGGCCG CAGGCGGTGA GGGCGAGGTT TATCAGATTG CGTACAACCA TTCCAATTAC ATGGGGGTCA TGGGGAAACT GACGAACGAC TTCCAGAAGA AGTTTGGCGA CGACTTCTAC ACTTTCTCCA TCTACAACGG CCTCGTGCTT TTGAGTGAAG GCATGGCCAA GGCAAAGTCC ACCGACCCGG TCAAGGTGGC CGCCGCGATG GAAGGGTTGA AGTTCCAGGG CTTCAACGGA GATTCCGAGA TGCGCAAATC AGATCACCAG ATGCAGCAGG GCTTGTACAT CTCCAAATGG CAAAAAGTGG ACAAGAAGAA CCCCTATAGT GCAGAAAAAA CCGGCTACAC CTTTGCGCCG GTCAAATACA TTGAGGCGTA TGTGGCCAGC ACACCCACCA GTTGCCAGAT GAAACGCCCA GGCTAA
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Protein sequence | MKFVMNLVAA TAALLCAGGA LAQKGETVKI AMIEGLSGPM ANVGQNQLKN WQFLADPANG VRNPAGVKFE IVGMDSKGSP QEALNTFKAA VDQGFRYIAQ GNGSGAALAL SDAVAKHNER NPGKEVVYLN YSAVDPALTN EKCNYWHFRL DADTSQKMEA LTSFMKDKPE VKKVYLLNQN YSHGQQVSKY FKEGMARKRP DAQMVGDDLV PMGQVKDFSP YVAKIKASGA DTIVTGNWGQ DLTLFVKALN DSGLKLPMYT YYAGVSGTPT ALAAGGEGEV YQIAYNHSNY MGVMGKLTND FQKKFGDDFY TFSIYNGLVL LSEGMAKAKS TDPVKVAAAM EGLKFQGFNG DSEMRKSDHQ MQQGLYISKW QKVDKKNPYS AEKTGYTFAP VKYIEAYVAS TPTSCQMKRP G
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