Gene Rfer_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2382 
Symbol 
ID3962833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2622437 
End bp2623306 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID637917200 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_523630 
Protein GI89901159 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase
[COG2153] Predicted acyltransferase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.715533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA CGAGCCGCCA GGCGTTCCGC TTTTTCCACC GCCTGCGTGT GCGCTGGGCT 
GAAGTGGACA TGCAAAAGAT CGTTTTCAAC GCGCATTACC TGATGTACTT TGACACGGCC
ATCACCGACT ACTGGCGGGC TCTGGCCCTG CCGTACGAGG TCACTTTTGC GGCCTTGCAG
GGTGACTTGT ACGTCAAGAA AGCCACCGTG GAATTTCACG TGTCGGCACG GGTCGACGAT
CAACTGGACG TGGCGCTCAA ATGCCATCGC ATCGGCACCT CGTCCATTGT TTTCATCGGC
TCTATTTTTC GGGGTGAAGA ACACCTGATC AGTTGCGAGC TGATTTACGT GTTTGCCGAT
CCCGCCACAC AGACTTCCCG GCCGGTCCCG GCGTCCCTGC GTGACATCCT GCTGGGCTAT
GAGGCTGGTC AAACCATGAT TGAGGTCGCG GTCGGTGATT GGCAAATGCT GGCTGAAGGC
GCGCGTACGG TGCGGGAGGA AGTGTTTGTG CAAGAGCAGC AGATTCCGAT TGAGATGGAG
CAAGACGAGT CCGATAAAAC AGCACTCCAT GTGCTCATTC GAAACCGGCT GGGCCTGCCC
GTGGCCACCG GGCGACTGTT GCAGCCGACG CCGGGTATTG GCCAAATTGG CCGTCTGGCC
GTGAACCGCG TGCTGCGCGG CTCACATCTT GGCCGCGCGG CGCTGCAAGC CTTGATGACT
GCGGCCGCCC ATCGTGGCGA CTTTGAGGTG CTGTTGCACG CGCAAAGCAG CGCCCAGGGT
TTTTATGCGG TACAAGGTTT TGTGCCGCGC GGCGAACCCT TCATGGAAGC CGGGATTAGA
CACATTGAGA TGGTGCGTGT GCTGAGGTAA
 
Protein sequence
MTDTSRQAFR FFHRLRVRWA EVDMQKIVFN AHYLMYFDTA ITDYWRALAL PYEVTFAALQ 
GDLYVKKATV EFHVSARVDD QLDVALKCHR IGTSSIVFIG SIFRGEEHLI SCELIYVFAD
PATQTSRPVP ASLRDILLGY EAGQTMIEVA VGDWQMLAEG ARTVREEVFV QEQQIPIEME
QDESDKTALH VLIRNRLGLP VATGRLLQPT PGIGQIGRLA VNRVLRGSHL GRAALQALMT
AAAHRGDFEV LLHAQSSAQG FYAVQGFVPR GEPFMEAGIR HIEMVRVLR