| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2365 |
|---|
| Symbol | fumC |
|---|
| ID | 3961500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2603365 |
|---|
| End bp | 2604777 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637917182 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_523613 |
|---|
| Protein GI | 89901142 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCA CACGCACCGA GTCCGACAGC TTTGGTCCCA TCGAAGTCCC TCTCGAGGCC
TTGTGGGGCG CACAGACGGC GCGCAGCCTG CGCTTCTTCG CCATTGGCGA GCAGCGCATG
CCGCTGCCGG TGATTCACGC GCTGGCCTGG GTCAAGTGGG CCGCGGCCAT CATCAATTGT
GATCTGCACC TGCTGGACGG CACCAAGTCG CAGGCCATCG CGGATGCTGC GCGGCGCGTG
GCCACTGGCG AGTTTGATGC CGAGTTTCCC TTGTCGCTGT GGCAGACCGG CTCGGGCACA
CAGAGCAACA TGAATGTCAA CGAGGTGGTG GCCAACCTGG CCTCGCGCGC ACTCGGCGGT
GACGTGGGTG CAGCGCGAAA AATCCACCCC AATGACGATG TCAACCTTGG GCAGTCGTCC
AACGATGTAT TCCCCACCGC CATGCACATC GCGGCGGCCC TGCAGGCCAA GCTGAATTTG
CTGCCGGCGC TGCAAGCCTT GCGCAGCGCA CTCGCGGCCA AGGCCCTTGA ATTCGAAGCG
GTCGTGAAGA TCGGCCGCAC GCACCTGCAA GACGCGACGC CGGTGACGCT GGGCCAGGAG
TTTGGTGGCT ACGAGGCGCA ACTCGCGCTG TGCGAGAAAA GCATCCGTTA CGCCCTGCTG
GCGCTGCACA GGTTGGCCAT TGGCGGCACG GCGGTGGGTA CCGGGCTGAA CACCCACCCG
CAGTTCGCCG CGCGCGTGGC TGCCCTGCTG GCAAACCAGC TCGACCTGCC ACTGGCGCAG
GCCGACAATT TATTTGCGGC GATGGCCGGT CACGAAGCGC TGGTGGCCTT GCATGCCAGT
CTGAAGATGC TGGCCATTGC CTTGACCAAA ATTGGCAACG ACATTCGCTT GATGGGCAGC
GGGCCACGGG CGGGTCTGGG CGAACTGCAA TTGCCCCAGA ATGAGCCCGG CAGCTCGATC
ATGCCCGGCA AGGTGAACCC GACCCAGGTC GAGGCGCTGA CCATGGTGTG CGCCCAGGTG
ATCGGGCATG ACGCCGCCAT AGGTTTTGCC GCGAGCCAGG GCCACTTTGA ACTCAACGTG
TACAAACCCC TGATCATTTT CGACACACTC GACAGCCTGC GTCTGCTGAC GGACACGATG
CGCAGCTTTA ACCAGCATTG CGTGGCGGGC CTGTCTGTCA ACGCGGCGCG GGTTGAAGAA
TTGTTGCAAA GCTCGCTGAT GCTGGTCACT GCGCTCACGC CACATATCGG TTACGACCGC
GCGGCTCAGA TCGCCAAGCA TGCGTATAAA AATGGCACGA CGCTGCGCGA AGCGGCGCTG
GCGCTCGGCG CCGTGAGCGC GGAACAATTT GACGCCTGGG TGGACCCTCG GCAGATGCTT
CAGCCCCGCG ATTCGACCAA GGCAGACCAG TGA
|
|---|
| Protein sequence | MAPTRTESDS FGPIEVPLEA LWGAQTARSL RFFAIGEQRM PLPVIHALAW VKWAAAIINC
DLHLLDGTKS QAIADAARRV ATGEFDAEFP LSLWQTGSGT QSNMNVNEVV ANLASRALGG
DVGAARKIHP NDDVNLGQSS NDVFPTAMHI AAALQAKLNL LPALQALRSA LAAKALEFEA
VVKIGRTHLQ DATPVTLGQE FGGYEAQLAL CEKSIRYALL ALHRLAIGGT AVGTGLNTHP
QFAARVAALL ANQLDLPLAQ ADNLFAAMAG HEALVALHAS LKMLAIALTK IGNDIRLMGS
GPRAGLGELQ LPQNEPGSSI MPGKVNPTQV EALTMVCAQV IGHDAAIGFA ASQGHFELNV
YKPLIIFDTL DSLRLLTDTM RSFNQHCVAG LSVNAARVEE LLQSSLMLVT ALTPHIGYDR
AAQIAKHAYK NGTTLREAAL ALGAVSAEQF DAWVDPRQML QPRDSTKADQ
|
|---|
| |