Gene Rfer_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2227 
Symbol 
ID3961958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2442088 
End bp2445135 
Gene Length3048 bp 
Protein Length1015 aa 
Translation table11 
GC content64% 
IMG OID637917047 
ProductXRE family transcriptional regulator 
Protein accessionYP_523481 
Protein GI89901010 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGC AGAGCAATTC TTTCGGATAC TGGCTGCGAC GGCGGCGCAA GGCGCTTGAT 
CTGACCCAGG ATGCGCTGGC CAAAAAAGCC TGTTGTTCGC TGGCCGCCAT CAAGAAGATC
GAAGCCGAGG AGCGTCGACC TTCGCGAGGA CTGGCGCAAC GCCTGGCCGA GCAACTCGCG
ATTCCCGCCC AGGACCGGGC AGCGTTTTTG CAGGCTTCCC GCAACCTGCA AGCGCCCAAG
CGCATGCCGC TTGATGAGTT GCCCATCGAA GCAATGCGCA CCGCTGCCGC GAGCGACGGA
CTCGGGACTG TCGGCGATCA GCTCGCCCAT GCCGGCGAAC AAAAATTCCC CTTCGTCGGG
CGCAACAAGG AGTACGGGCA GTTCATCGGT CTGATCGCCC GACTCACCGC GGGCAGCGGC
CAGGTGGTAC AGATCGAAGG TGAGGCGGGC ATCGGCAAGA GCCGACTCAT GGCTGAGGTC
GCGTGTTATG CCCGCCAGCG GGCGTTGCCG GTGCTGGCCA CCAATTGCTA CGAGATCGAG
CGCGCGATAG CGTATCAACC AGTGATCGAT CTCGCCACCC AAGCGTGCGA CGCAGCACCC
GAGGCCCGGC TGCGTTTGAT CGCGCCGATC CTGCTGGCCG AGATCGCCGC GCTGGTGCCG
GCCATGGCGG CCCGTCTGCT TGACCTGCCA TCCTTGTCGG CGGACTTTCC CGAGGCGCGC
CAGGCGCGCC TGTTTCATGC GCTGGTACAA CTCTTCGACG CGCTGGCGCA GGACCGGCAG
TTGATTGTCA TGATGGATGA CATCCAATGG GCGGACGACG CCAGCCTGCG ATTCCTGCAT
TTTTTCGCGC GCCAGATTGC GAGCCGGCCG GTGCTCCTGG CCTGTGCCTA TCGGGACGAG
GAACTGGGCA GCAACGAACA CCTCACTGGC CTGCTTGAGA GCCTGCGCCG TGAACCCTAC
ACGCGGCACA TGGCGCTGGC ACGGTTCGGA CCCGGCGATA CGCAAGCGCT GCTCAACGCA
ATGAACGACC CCAAACTGAG CGCGCCTGAT CTCGCCGCCC GGCTGCACCG TGAAACGGAC
GGCAATCCAT TTTTCCTCTG CTCGATCATG CACTCGCTGA GTGAAGATGA AGGCATGATC
GGCGACGCGC TCAGCCTGCC GCTGCCGCAC GCCCTGCGTG ACTCGGTGCG GGCGCGTCTG
GCCCGCGTGC CGCAGGAAGA CCGGCTGCTG CTGGATGTGG CAGCCGTGCT CGGGCGCCGT
TTTGACTTCG AGACCCTGCT CACGCTCGCT AGGGTGCCCG AAGAGCGCTT TTTGCACAGC
CTGGATGCGC TGGTGAAGCG CCGGCTGCTG CGAGAGGAGC AGGACGGCGA ATTCTATGAT
TTCAGTCACG ACAAGGTGCG AGAGGTGGTG TACCGGGATA TCGGCATGGC CGGGCGCGTG
CTGCTGCACC GGGCGGTGGC GGAGATGCTG GAGCAGCATG CTGAAAGTGA AACGCATGAG
CGCCATGCCC ATCTTGCCGA GCACTATGAG CGCGGCAAGA TGTGGCCCAA GGCGCTGCTT
TATTTGGGTC TGGCCGCCGC GCACTCGCAA AAATTATTTG CAATGCGAGA AGCGCTGAAA
TGGTTTGACC GCGCCGTCGT GTTACTGCAA GCCCATCCCG AAGCGGCAAC GCAAGCCCAA
CAACTCGCCT TGTACGAGCA GCGTGGCGCG GCGCGGGCGC AGGCAGGCCA GATCGAGGGC
GCGGTGGCCG ATTTTCAACG GGTGATCGAT GCCGCGCGCG CGTTGGGTGA GCACGGGCAT
GCGCGTGATG TATTGATTCA GCTCGGCATG GCTTATCGAC GCGCCGACGC CTACCAGCAG
GCCATTGTCT GCTTGGACGA GGCGCTCACG GCGTCGCTGG CCATGGGCGA TGAACGCCAT
GCGGCCGATA CCTTGTATCA CCTGGGAACG GTGGCCTGGA GCAACGGTCG CAACGATCTG
GCGATCACCT ACCACCAACA AGCGGTGGCG ATCTGCGAGC GCCTGGGCCT GACTGACCTG
GTCGCCGTGC AGGCCTTCCA CGGCCGAGGG GAAGCCTATT TCGCCAATGC CGAACCGGCG
GCGGCCATCG TTTCTTTTTC CCGTTCTCTC GACCTTGCAC GCGGCATCGG CGACAAGAGC
TATGAATCGG AAAACCTGAT GATGATCGGC TGGGCCTGCA GCGGTCATAT GGGGCTGGCC
GACTACCCAC GCGCCTTGTC ACACTTCGAC GCCGCCCTCG TCATCGCGCG CGCCGCCGAC
CTGCAATGGC ATATCGGCCC GACCCTGATC GGACGCGCCA ACGTGCAGGT GGCGCTCGGC
CGATTTGGCC AGGCATGGCA TGATTTGAAC GAGGCCCTGC CCCGCCTTGA AACACTGGGG
TTGGTTCGGT ACCAGATCAT GGCGCATGAC GCGCTGGGCG GCCTGTTTCT GGACCTGAAT
CAGCCCGGGC AGGCGCTGCG GCACTTTGAA CAGGGGCTGT CGCTCGCGCG CGACGCCGGC
ATCAAGTTCT GGCAGCCCAG GCTGCAAGCC GGTCTGGTGA TTGCACAACT GCGCCTTGGT
GTGCCAACTG ATCGGGCAGC ATTACTGGCG GCTCAGCAGT ACACGCAGGA TCACAGTGAA
ACCTGGCTGA CGCTACGCTG CCTGGAGGCG CTCGCCGAGT TGGCGCTGGC CAGAGGCGAC
GCCGACGGGT GCGTCACGCA GGCGGACCAG TTGCTGGCGC TGGCCTCGCG CGGCGACTTG
CGGGAGCTGA TCGGACAAGC CCATCGCTTG CGCGGCCTGG CCTGGCTCCA TGGCAAGGCA
TACGAATCTG CGCGCGATGA GCTGACGCTG GCCGCAACGC TGGCCGAGCA GATCGGGTGC
GTCCGGCTCG CGTGGGAGTG TCACTGCGCG CTCGCTCGCG TTGCCGCTGC GCTCGGCGAC
GGCAGCGGCG AAAACACCCA GCGAGCCGGC GCACGCGTGC TGGCTGCACA AGTTGCCGAG
AATCTGCGTG GCTCGGGTCT GATTTCCAAT TTGGAGGCAG ATCCGTGA
 
Protein sequence
MIEQSNSFGY WLRRRRKALD LTQDALAKKA CCSLAAIKKI EAEERRPSRG LAQRLAEQLA 
IPAQDRAAFL QASRNLQAPK RMPLDELPIE AMRTAAASDG LGTVGDQLAH AGEQKFPFVG
RNKEYGQFIG LIARLTAGSG QVVQIEGEAG IGKSRLMAEV ACYARQRALP VLATNCYEIE
RAIAYQPVID LATQACDAAP EARLRLIAPI LLAEIAALVP AMAARLLDLP SLSADFPEAR
QARLFHALVQ LFDALAQDRQ LIVMMDDIQW ADDASLRFLH FFARQIASRP VLLACAYRDE
ELGSNEHLTG LLESLRREPY TRHMALARFG PGDTQALLNA MNDPKLSAPD LAARLHRETD
GNPFFLCSIM HSLSEDEGMI GDALSLPLPH ALRDSVRARL ARVPQEDRLL LDVAAVLGRR
FDFETLLTLA RVPEERFLHS LDALVKRRLL REEQDGEFYD FSHDKVREVV YRDIGMAGRV
LLHRAVAEML EQHAESETHE RHAHLAEHYE RGKMWPKALL YLGLAAAHSQ KLFAMREALK
WFDRAVVLLQ AHPEAATQAQ QLALYEQRGA ARAQAGQIEG AVADFQRVID AARALGEHGH
ARDVLIQLGM AYRRADAYQQ AIVCLDEALT ASLAMGDERH AADTLYHLGT VAWSNGRNDL
AITYHQQAVA ICERLGLTDL VAVQAFHGRG EAYFANAEPA AAIVSFSRSL DLARGIGDKS
YESENLMMIG WACSGHMGLA DYPRALSHFD AALVIARAAD LQWHIGPTLI GRANVQVALG
RFGQAWHDLN EALPRLETLG LVRYQIMAHD ALGGLFLDLN QPGQALRHFE QGLSLARDAG
IKFWQPRLQA GLVIAQLRLG VPTDRAALLA AQQYTQDHSE TWLTLRCLEA LAELALARGD
ADGCVTQADQ LLALASRGDL RELIGQAHRL RGLAWLHGKA YESARDELTL AATLAEQIGC
VRLAWECHCA LARVAAALGD GSGENTQRAG ARVLAAQVAE NLRGSGLISN LEADP