| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2202 |
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| Symbol | |
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| ID | 3963149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2407444 |
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| End bp | 2408004 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917023 |
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| Product | peptide deformylase |
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| Protein accession | YP_523457 |
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| Protein GI | 89900986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.113404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCATTC GTGAAATTCT CAAAATGGGC GATCCACGCT TGTTGCGCAT CGCACCACCC
GTGACCCTGT TCGATACGGA CGAATTGCAT CTGCTGATCT CGGACATGCT CGACACCATG
CTGGCGGCCG ATGGCGCCGG GCTGGCGGCG CCGCAAATCG GGGTCGACCT GCAACTGGTG
ATTTTTGGCT CCAACGCCCG CAATCCGCGT TATCCGCAGG CGCCGGTGGT GCCTCAAACC
GTCTTGCTCA ACCCTGTGAT TACACCGTTG CCGCCATCAG AAAACGACGC AACGCCGCTG
CAGGTTGAAG ACTGGGAAGG CTGCCTCTCC GTGCCGGGCC TGCGTGCCAT GGTGCCGCGT
TTTGCCCGTA TTCGCTATAC CGGGTTCGAC CAGTACGGCG ACCCGATCAA CCGCACGGTG
GAGGGTTTTC ATGCCCGGGT GGTGCAGCAC GAGTGTGACC ACTTGATCGG CAAGCTGTAC
CCGATGCGGG TGCGCGACTT CAGCCGCTTT GGTTTTACCG ACGTTCTTTT TCCGGGGCTG
GATGCCGGGC AGGACGACTG A
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| Protein sequence | MAIREILKMG DPRLLRIAPP VTLFDTDELH LLISDMLDTM LAADGAGLAA PQIGVDLQLV
IFGSNARNPR YPQAPVVPQT VLLNPVITPL PPSENDATPL QVEDWEGCLS VPGLRAMVPR
FARIRYTGFD QYGDPINRTV EGFHARVVQH ECDHLIGKLY PMRVRDFSRF GFTDVLFPGL
DAGQDD
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