Gene Rfer_2142 details

Gene Information

• Locus tag: Rfer_2142
• ID: 3962094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2323463
• End bp: 2324173
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637916962
• Product: nitroreductase
• Protein accession: YP_523397
• Protein GI: 89900926
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000385966
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCCAT CCGGCCTGGA CGCCGCGCTC GTGGACGCCG CCATCAGCTC GCGCATGTCC 
GCGCGTGCCT TCACTCAAGC GCCGGTGTCG CGTCAGACCC TGACGGCCTT GCTGCAGGTG 
GCGAGCCGCG CGCCCTCGGG CACCAACACG CAGCCCTGGA GGGTTTATGT GTTGCAGGGG 
GAGAGTCGTG CTGCCTTGGT GGAGAAGGTA TGCGCTGCGC ACGACGCCGT GCGCGCCAAT 
CCGGTATTGG CCCATGAATA CCGCGAAGAA TATGACTATT ACCCCGAAAA ATGGGTCAGT 
CCCTACATCG ACCGGCGGCG CGAGAACGGC TGGGGCCTGT ACAACCTGTT GGGCATTGGC 
AAAGGGGACA AGGACAAGAT GCATTTGCAG CATCAGCGCA ATTACAGGTT TTTTGACGCG 
CCGGTGGGTT TGATGTTCAC GTTGGACCGG GTGATGGGCC GCGGCTCGCT GCTGGACTAC 
GGCATGTTCC TGCAAAACAT CATGGTGGCG GCGCGCTCTC GTGGCCTGCA TACCTGCCCG 
CAGGCGGCGT GGAACGGCTT TGCCAAAATC ATCCTGCCGC ACATCGGCGC CGGGGCCGAC 
GAGATGCTGG TCTGCGGCAT GGCGCTGGGT TACGCCGATG AAGACGATGT GGTGAATACC 
TTTCGTACGC CGCGGGTGCC GGTGGCAGAG TTCACGCACT GGCTGACTTG A 

 

Protein sequence

MTPSGLDAAL VDAAISSRMS ARAFTQAPVS RQTLTALLQV ASRAPSGTNT QPWRVYVLQG 
ESRAALVEKV CAAHDAVRAN PVLAHEYREE YDYYPEKWVS PYIDRRRENG WGLYNLLGIG 
KGDKDKMHLQ HQRNYRFFDA PVGLMFTLDR VMGRGSLLDY GMFLQNIMVA ARSRGLHTCP 
QAAWNGFAKI ILPHIGAGAD EMLVCGMALG YADEDDVVNT FRTPRVPVAE FTHWLT