| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2128 |
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| Symbol | |
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| ID | 3962080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2305825 |
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| End bp | 2307636 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916948 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_523383 |
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| Protein GI | 89900912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.603606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATT GTCGCATGCG ACGTTTGTTT TTTTTATGCT TGTCTGTTGT CTGCAATCCG
TTGTGGGCGG CGCATGGGTA CGCGCTGTGG GGTGATCTGA AGTACGGTGC CAATTTTTCC
CACTTCAATT ATGTCAACCC GAACGCGCCC AAGGGGGGTG AACTGCGGCT GGTGAGCAAT
CTGCGCGTGT CCACTTTTGA CAAGTACAAC CCGTTCACGA TCAAGGGCTC GGCCCCGGCG
TATCTGGCGG ACTTGATGTT TGACTCGCTG CTGACGGGCG CGCTGGATGA AACCGGCGCC
GGTTACGGCC TGCTGGCGCG TGATGTGGAC GTGGCGCCAG ATGGCTTGAG CGCCACCTTT
CGCCTGGCGC CCGAGGCCCG TTTTCACAAC GGTGACCCGG TGTTGGCCCA GGACGTGAAA
TACAGCTTTG ATACTTTGAT GGGGCCGTAC ACGTCGCCCG CCTACAAGAG CCTGCTCGAA
GATGTGGCGG GTCTGGAGGT GCTTGATGAG CGCACTGTGC GTTATCGCTT CAAAAAACCG
AACCGGGAAC TGCCCCTCAC CGTCGGTGGT CTGCCGGTGT TCAGCCGGGC CTGGGGCAGG
GTGAATGGCA AGCTCAAGTC ATTTGATCAA ATCGTCACCG ACATCCCGAT TGGCAGTGGC
CCTTACAAAA TTGGCCCGGT GCGCTTTGGC AAAGACATTA CTTATGTGCG TGACCCGAAC
TATTGGGCCA GGGACCTGAA TGTGAAGCGT GGCAGCAACA ACTTTGACCG CATCACGGTC
AAGATTTACA AGGATGGTAC GGCGCGACTG GAAGCGCTCA AAGCCGGTGA GTTTGATTTG
ATGCGGTTTT TCTCGGCTGG CGATTGGGCG CGCCGGGTGA ACGGCAAGCG TTTTGACACT
GGTGAGTTGG TCAAGGCTGA GTTCAAACAC CGTTTACCGA CCGGCTTTCA GAGCTATGTG
CTCAACACCC GGCGCGACAA ACTCAAGGAC ATACGCGTGC GCCAGGCGCT GGGCTTGGCG
CTGGATTTCG AATGGATGAA CCGGCAGATG TTCTACAACG CCTACCAGCG CGTCAATGGC
CTGTTCGGCA ACACCGATTG CCAGGCCAGC GGGATGCCCA GCGTGCAAGA ACTGGCGTTG
ATGACCCCTT GGCGCCAAGA CATCCCGCCA GCCGCTTTTG GCCTCATGGC GGTCGCGCCG
CGCACCGATG GTGATTCATC CCTGCGCGCC AACCTGCGCC AGGCCCAGTC CCTGCTGAAG
GCCGCAGGCT GGGAGGTGCG CGATGGGGCC TTGCGCAACG CCCAGGGCCA GGCGTTTGAA
ATTGAGTACC TGGACAGCAA CGAGAGCGGT GCCCGCATGG CGTCGCCGTG GGCGCGAAAT
CTGGAAAAAA TTGGCATCAG TTTGAGCTTT CGCCCGGTGG ACTTTGCCCT GTACCAGCAA
CGCCTGCAGA AGTTTGAGTT TGACATCACC TCGATCGCCT ACGGCGGCAC CCACAACCCG
GGGCAGGAGT ATGCGGACAT GTTTGGCTCC AAGGCGGCCG ACCAGGAAGA TTCCGGCAAT
TTTGCGGGCG TCAAGAACCC GGCCGTCGAC GCGTTGATCA GCGCGATGAC CAGCGCCAGG
TCCAAGGCCG AACTGCTGCC CGCGTGCCGT GCGCTGGATC GTGTCATCAG TCACAGTCAT
TTTCTGATTC CCCAATGGAG CGCGGGCACA CATCGCATGG TGTACAACAG TTGGCGCCTG
GCCAAACCCG AGTCGATGCC GCCCTATGCG GCGGGCGAGG GCTGGGCGAT CGACACCTGG
TGGGCCAAAT AA
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| Protein sequence | MQNCRMRRLF FLCLSVVCNP LWAAHGYALW GDLKYGANFS HFNYVNPNAP KGGELRLVSN
LRVSTFDKYN PFTIKGSAPA YLADLMFDSL LTGALDETGA GYGLLARDVD VAPDGLSATF
RLAPEARFHN GDPVLAQDVK YSFDTLMGPY TSPAYKSLLE DVAGLEVLDE RTVRYRFKKP
NRELPLTVGG LPVFSRAWGR VNGKLKSFDQ IVTDIPIGSG PYKIGPVRFG KDITYVRDPN
YWARDLNVKR GSNNFDRITV KIYKDGTARL EALKAGEFDL MRFFSAGDWA RRVNGKRFDT
GELVKAEFKH RLPTGFQSYV LNTRRDKLKD IRVRQALGLA LDFEWMNRQM FYNAYQRVNG
LFGNTDCQAS GMPSVQELAL MTPWRQDIPP AAFGLMAVAP RTDGDSSLRA NLRQAQSLLK
AAGWEVRDGA LRNAQGQAFE IEYLDSNESG ARMASPWARN LEKIGISLSF RPVDFALYQQ
RLQKFEFDIT SIAYGGTHNP GQEYADMFGS KAADQEDSGN FAGVKNPAVD ALISAMTSAR
SKAELLPACR ALDRVISHSH FLIPQWSAGT HRMVYNSWRL AKPESMPPYA AGEGWAIDTW
WAK
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