| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2025 |
|---|
| Symbol | |
|---|
| ID | 3961773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2184823 |
|---|
| End bp | 2185944 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637916845 |
|---|
| Product | putative carboxypeptidase |
|---|
| Protein accession | YP_523281 |
|---|
| Protein GI | 89900810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAATA ACGACGCCTA TACAGACAAG CGTTGCACGC GCGACGGATT CGACGCTAAG
CTCACCGTTC ATGACGATCG TCCTTCAACT CTCATTCCAT CGGCAACTGT GACGCAGACC
AGGCTGCCAG AATTGCTTGC GTTGGAGCGC ATCATTGAAT TGGGTGCGGC TTGGCTCGAA
ACACGCGTGG TCTGTAGCGT CAATTTGCCA GGCGGGGGCT CCTATCCGGT TCATGTCATC
GCATTGGGCA ATCCAGCGCC CGACGTGCCG GCGGTGGGTT ATTTTGGTGG TGTTCATGGC
CTGGAGCGCA TTGGCACCGG CGTGGTGATT TCGTATCTGC AAAGCTTGGT CATGCGTCTG
CAATGGGACA GCACCTTGCA CCGGCAACTT GAATCGGTTC GCCTGGTCTT TATGCCGATT
GTCAACCCCG GCGGCATGGC GCTTGGCACC CGGGCCAACC CCAACGGAGT GGACTTGATG
AGAAACGCGC CGGTTGAGGC GCAAGAGCCG GTGCCATTTT TGGTCGGCGG CCAGCGCTTG
AGCGCTGGCT TGCCCTGGTA CCGCGGTCTC AAAGGCCAGG CAATGGAAAT TGAGAATCAG
GCCGTGACCG ATGTGGTGAA AACTGAGTTG TTGCCCCGCA GCTTCAGCCT GAGCGTGGAT
TGTCATTCGG GTTTTGGTGC CAGCGACCGC ATCTGGTTTC CTTATGCCCA TACCCGGGTG
CCCATCACCC ACCTGGCAGA GATGCATGCC CTCAAGAGCA TTTTTGTGCA GTCGAACAGC
CATCACCGGT ACATTATTGA ACCGCAAAGC TTGCAGTACC TTGCGCATGG GGATTTGTGG
GACCATTTGT ACCAACAGTC ATGTGCGCAA GCCAAAAACA TATTTCTGCC GCTCACGCTG
GAGATGGGTT CCTGGCTTTG GGTGAAGAAG AATCCACGCC AGCTGTTTTC GCGGCACGGC
ATTTTTAATC CCCTGATCGA GCACCGCCAA CAGCGGGTGC TCCGCCAGCA CCAGTTGCTA
TTGGACTTTT TGTCGCGCGC TGCGTGCGGT CACCCACTTT GGCTTCCAGG CCATGAGACC
CGGGCGCAAC ACCATGCACA GGCGCTACAG GACTGGTATT GA
|
|---|
| Protein sequence | MSNNDAYTDK RCTRDGFDAK LTVHDDRPST LIPSATVTQT RLPELLALER IIELGAAWLE
TRVVCSVNLP GGGSYPVHVI ALGNPAPDVP AVGYFGGVHG LERIGTGVVI SYLQSLVMRL
QWDSTLHRQL ESVRLVFMPI VNPGGMALGT RANPNGVDLM RNAPVEAQEP VPFLVGGQRL
SAGLPWYRGL KGQAMEIENQ AVTDVVKTEL LPRSFSLSVD CHSGFGASDR IWFPYAHTRV
PITHLAEMHA LKSIFVQSNS HHRYIIEPQS LQYLAHGDLW DHLYQQSCAQ AKNIFLPLTL
EMGSWLWVKK NPRQLFSRHG IFNPLIEHRQ QRVLRQHQLL LDFLSRAACG HPLWLPGHET
RAQHHAQALQ DWY
|
|---|
| |