| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1967 |
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| Symbol | |
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| ID | 3963083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2112188 |
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| End bp | 2113552 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916786 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_523223 |
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| Protein GI | 89900752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.166456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA ACATTACTTT TCTGGGGGGC GCTGGCACCG TCACCGGCTC CAAATACCTG
GTGCGCCACG GCGCCGAATC TCTGCTGGTC GACTGCGGCC TGTTTCAGGG CTACAAGCCG
CTGCGCTTGC GCAACTGGAC CCGTTTGCCG GTCGCGCCGA ACCAGATTGA TGCGGTTGTA
TTGACCCATG CCCACCTGGA CCACAGCGGC TACCTGCCGC TGCTGGTCAG GGAAGGCTTC
GCCGGCCATG TGCACGCCAC CAGCGGCACA CGCGACCTGT GCCGCATCCT GCTGCCCGAC
AGCGGCCACA TCCAGGAAGA AGACGCTGCG TTTGCCAACC GCCACGGTTT CTCCAAACAC
GCGCCCGCCC TGCCCTTGTA CACCCGGCAA GATGCACTCG ATTGCCTGCC CCGGATCAAG
GCGGTCGACT TTGGCAAGAC CTTCCAGCCC ATCCCCGGCT GGCGCGTCAC GTTCTCCACG
GCCGGGCATA TTCTGGGTGC CGCCAGTGTG TTGCTGGAAG TGGCCGGACG GCGCATTCTG
TTCTCAGGTG ATCTGGGTCG CACCGACGAC CTGATCATGA ATCCCCCGGC GAAGGCGCCA
GCCGCCAACA CGGTCTTGAT CGAGTCCACC TATGGCGACC GCGAACACCC CAAGGAAGAC
GTGCTGGCCG AACTGGCGCC CGCGTTGCAA AAGCTGGCCA AGCGCGGCGG CGTGGCGGTG
ATTCCGGTGT TTGCTGTGGG GCGGGCACAA GCCCTGCTGC ACGCGATTCA TCAACTCAAG
CTGCGCGGCG AACTCCCCAC CTCGCTACCT GTATTTCTGG ACAGCCCGAT GGCCGTGCAC
ACCACCCATT TATTTGAGGC GCATCAGGGT GAACACCGGC TCAGCAGCAA GGACACCCAC
GCGCTGACGC ACAGCGCCAC CATGGTCAAC AGCACCGATG AGTCACGTGC CCTGGCCAGT
CGCCATGGCC CGATGGTGAT TCTGTCAGCC AGCGGCATGG CCACCGGCGG GCGCGTGCTG
CATCACCTCG CGCACTACGC GGGGAACCAC CGCAACATGA TCATCCTGAC CGGCTACCAG
GCACCCGGCA CCCGCGGCGC GACCATCGCC GGTGGCGCCA AGTCGGTGCG CATCCACGGC
CACGATGTGG AACTCCAGGC TGAAGTGGTG CAGTTGCAGT CGGCCTCAGC GCACGCAGAC
GCCAGTCAGC TGCTGGCCTG GCTGCGCACG ATGCCCCAGG CACCTGACCA AGTCTATGTG
ACCCACGGCG AGTGGGGTGC TTCAGACGAA TTTCGCAAAC GCATCAAGCA CGAGTTGGGC
TGGCGGGCCA TCATGCCGGA GCACGGTTCA ACCTGGCCGA CCTGA
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| Protein sequence | MSVNITFLGG AGTVTGSKYL VRHGAESLLV DCGLFQGYKP LRLRNWTRLP VAPNQIDAVV
LTHAHLDHSG YLPLLVREGF AGHVHATSGT RDLCRILLPD SGHIQEEDAA FANRHGFSKH
APALPLYTRQ DALDCLPRIK AVDFGKTFQP IPGWRVTFST AGHILGAASV LLEVAGRRIL
FSGDLGRTDD LIMNPPAKAP AANTVLIEST YGDREHPKED VLAELAPALQ KLAKRGGVAV
IPVFAVGRAQ ALLHAIHQLK LRGELPTSLP VFLDSPMAVH TTHLFEAHQG EHRLSSKDTH
ALTHSATMVN STDESRALAS RHGPMVILSA SGMATGGRVL HHLAHYAGNH RNMIILTGYQ
APGTRGATIA GGAKSVRIHG HDVELQAEVV QLQSASAHAD ASQLLAWLRT MPQAPDQVYV
THGEWGASDE FRKRIKHELG WRAIMPEHGS TWPT
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