Gene Rfer_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1962 
Symbol 
ID3963078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2106392 
End bp2106874 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID637916781 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_523218 
Protein GI89900747 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.72415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC CAGAATCAAC GAACTACGAC GGCGCCTGCA CTTGCGGCCA CGTGCGCTAC 
CGAATGACAA CAAAGCCCCT GTTCGTCCAT TGCTGTCATT GCCGCTGGTG CCAGCGCGAA 
TCTGGCGCAT CGTTCGCGTT GAATGCCATG ATCGAAGCCG ACCGCGTGCA ATTGCTGCAA 
GGTGCGGTGG AGGTTGTCAA CACACCGTCC CTCAGTGGCA AGGGTCAAAA GATATCGCGC 
TGCCCCCAAT GCCGAATCGC CGTTTGGAGC AATTACGCCG GGGCCGGAGA TGCTGTTCGC 
TTTGTTCGCG TCGGCACGCT CGATGAACCA GACCGTCTGC CACCCGACAT CCACATTTTC 
ACGGCATCCA AGCAGCCCTG GGTTGTGCTC GGGCCCGACA CCCCGGCTGT TGAGGAATAT 
TACGAAGCTT CACAGATGTG GCCGGCCGAC AGTCTGGCGC GTCGCGCACA AATGCCCCTA 
TGA
 
Protein sequence
MSTPESTNYD GACTCGHVRY RMTTKPLFVH CCHCRWCQRE SGASFALNAM IEADRVQLLQ 
GAVEVVNTPS LSGKGQKISR CPQCRIAVWS NYAGAGDAVR FVRVGTLDEP DRLPPDIHIF 
TASKQPWVVL GPDTPAVEEY YEASQMWPAD SLARRAQMPL