| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1930 |
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| Symbol | |
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| ID | 3960768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2073875 |
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| End bp | 2075311 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916750 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_523187 |
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| Protein GI | 89900716 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000131874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT CAAATACGCT AGCAACTACC TACGACGATA AGGTTGTCAG GCAGTTTGCT
GTCATGACGG TGGTCTGGGG CGTGGTCGGT ATGCTGGTGG GCGTGATCAT TGCCGCCCAG
TTGGCTTGGC CGGAGCTGAA TCTTGGTATT TCCTGGCTTA GCTACGGTCG TTTGCGCCCC
TTGCACACCA ATGCGGTGAT TTTTGCCTTT GGCGGCTGTG GTTTGTTTGC CGCTTCTTAC
TATGTGGTTC AGCGAACCTG TCAGGTTCGT CTGTTTGCGG GTGGTCTGGC CTCTTTCACT
TTTTGGGCCT GGCAACTGGT TATTCTCTCC GCTGCTGTTT CTCTGCCATT GGGGTTTACC
CAAGGCAAAG AATATGCAGA ACTGGAATGG CCGATTGACA TCCTGATTAC GGTGGTCTGG
GTTTCCTACG CGATCGTGTT TTTTGGCACG GTCGGCACCC GCAAAGTTCG TCATATTTAT
GTGGCGAACT GGTTTTTTGG CGCTTTCATT CTTGCTGTGG CGTTGCTGCA TTTGGTTAAC
AGTGCCGCCA TTCCCGCGGG CTACATGAAG TCGTACTCAG CGTATGCGGG TGTGCAGGAT
GCCATGGTGC AGTGGTGGTA TGGCCACAAC GCAGTTGGGT TCTTTTTGAC GGCAGGCTTC
CTGGGCATGA TGTATTACTT CATTCCCAAG CAGGCTGAGC GGCCGGTGTA TTCATACCGC
CTGTCCATTG TTCACTTTTG GGCGCTGATC TTCACTTATA TGTGGGCAGG CCCGCACCAT
CTGCACTACA CCGCGCTGCC GGACTGGACG CAATCGGTGG GGATGGTGTT TTCCCTGATT
TTGCTGGCAC CAAGCTGGGG CGGCATGATC AACGGCATCA TGACCTTGTC GGGTGCCTGG
CACAAACTCC GTGATGATCC TATTCTGCGT TTCCTGATTG TGTCGCTGTC GTTTTATGGC
ATGTCGACCT TTGAAGGTCC GATGATGTCG ATCAAGACCG TCAATGCCTT GTCGCACTAC
ACCGACTGGA CCGTGGGTCA CGTGCACTCA GGAGCGCTGG GTTGGGTGGG TCTGGTGACC
ATGGGCTCCA TGTACTACCT GATCCCGCGT CTGTTTGGCC AGAAGCAGAT GTACAGCGTG
AAGGCCATTG AGGTGCATTT CTGGACCGCG ACGATTGGAA TCGTGATCTA CATCGCGGCC
ATGTGGATTG CCGGTGTGAT GCAGGGTTTG ATGTGGCGCT CGATCAACCC CGATGGCACC
TTGACCTACA CTTTTGTGGA ATCCGTCAAG GCCACGTTCC CGTTTTATGT GTTGCGTTTG
CTAGGTGGTC TTTTGTACCT CGGAGGCATG CTGGTCATGC TCTGGAACAC GTTCAAGACG
GCGACCAATG GCCGTTCCGT CACCGTGACC ATTCCGGCCG CTGTTGCCCA CGCTTGA
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| Protein sequence | MAFSNTLATT YDDKVVRQFA VMTVVWGVVG MLVGVIIAAQ LAWPELNLGI SWLSYGRLRP
LHTNAVIFAF GGCGLFAASY YVVQRTCQVR LFAGGLASFT FWAWQLVILS AAVSLPLGFT
QGKEYAELEW PIDILITVVW VSYAIVFFGT VGTRKVRHIY VANWFFGAFI LAVALLHLVN
SAAIPAGYMK SYSAYAGVQD AMVQWWYGHN AVGFFLTAGF LGMMYYFIPK QAERPVYSYR
LSIVHFWALI FTYMWAGPHH LHYTALPDWT QSVGMVFSLI LLAPSWGGMI NGIMTLSGAW
HKLRDDPILR FLIVSLSFYG MSTFEGPMMS IKTVNALSHY TDWTVGHVHS GALGWVGLVT
MGSMYYLIPR LFGQKQMYSV KAIEVHFWTA TIGIVIYIAA MWIAGVMQGL MWRSINPDGT
LTYTFVESVK ATFPFYVLRL LGGLLYLGGM LVMLWNTFKT ATNGRSVTVT IPAAVAHA
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