| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1927 |
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| Symbol | |
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| ID | 3960765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2069182 |
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| End bp | 2071569 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916747 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_523184 |
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| Protein GI | 89900713 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTG CCAGTCCGGC CGTCGCCGTC GCGGCGCCAC CTGTCCCGAT CAATCCAGAT
GACAGCAGTC CAGCCCAAGC GCCAGGTTCT GAGGCGGCTG TAGAGAGGCT GCGGCTGCTG
GATGACCCGC AGGAGTGGTC GGCCTTCAGT CGTCCTGATG TCAAGCGCGC CAATTATTGG
GAGTCCAACA TCCTGATTGA AGGCATGCAC TGCGCGGCCT GTGCCTTGAC GCTTGAAGAT
GCGTTGCTGG GCGTGCCGGG CGTGGTGACG GCCGACGTCA GTGCTGGCAG CCATCGTGCG
CGCGTCGTCT GGTCGGCAGA TGCGGTGCGC CCGTCGGACT GGATGGGTGC GGTGCAAGCG
GCCGGTTACC GTGCTGTGCC GGCCAACGAT GCGTTTGCCC GCGAGCGCCG AAAAACCGAA
GCGCGCAAGG CGCTTTGGCG CCTGCTGGTG GCCGGGCTGT GCATGATGCA GGTGATGATG
TACGCCTACC CGGCCTACGT CGCAGAGCCT GGTGATTTGA CGGCCGAAAT GGAGCAACTG
CTGCGCTGGG CGTCCTGGGT GTTGACGCTG CCGGTGGTCC TGTTCTCCTG CGGGCCGTTC
TTTGGCAGTG CCATGCGCGA CGTGTTGCAT CGCCGCATCA GCATGGATTT GCCGGTGGCC
TTGGGCATGC TGATTACTTT TGCCGTTAGC ACCGCTGGCA CGTTTGAGCC GCTGGGTATT
TTTGGTCGTG AGGTCTATTT CGACTCGCTC ACCATGTTTG TTTTCTTCCT GTTGTCTGGC
CGCTGGCTGG AATTGCGCCT GCGGGATCGA ACCGCCGGCG CGCTGGAAGT CTTGATGAAC
CGCTTGCCCG ACAGCGTGGC GCGCCGGGCT GGAGACGGAA CTTATGAACG TGTGCCGGTG
CGCCGCCTAG TGGCGGGCGA CGTCATGCGA ATCCTGCCGG GTGAGACTTT TCCGGCTGAT
GGTGTGGTGC TGCAAGGCGA GACAACGGTC GATGAGGCCT TGCTCACGGG CGAGTCGCGC
CCGGTCGCGC GTGGCGTTGG CGCGGCGGTG ATCGCCGGCA GCCATAACCT CTCAACCGTG
GTTCAGGTTC GGGTCGAGCG ACTCGGCCAT CAAACCCGTT TTGCCCAGAT TGTGGCGTTG
ATGGAAAGCG CGTCAACAAC CAAGCCACCG ATCGCGCGCC TGGCGGATCG CATTGCCAAG
CCTTTTTTGT TGGCGGTCCT GTTGGCCGCG GGTCTGGCTG CTGCTTTCTG GTGGGGGCGG
GGACCGGGCC ATGCGCTGAT GGTGGCGGTG GCGGTGCTGG TTGTGACCTG CCCTTGTGCC
TTGTCATTGG CAACGCCGGC TGCCATGTTG GCGGCAGCGG GCACTTTGGC GCGACGGGGC
GTGCTGGTAC GTCGACTGGA GGCCTTTGAG GCGTTGGCGG CGATTGACAC GGTGGTGTTT
GATAAAACGG GCACCTTGAC GCGTGATGCC ATGGTATTGG GGGACGTTCA GACGCGAGCG
GGCGTTGCCC CAGAGCAGGC GCTGGCCATG GCGGCCACTT TGGCGCACTA TTCACTGCAC
CCGGTATCGC GGGCCTTGGT ACTGGCGGCG GTCGGGGCCG CAAGCTCTGC GCCCTGGCAG
GCCGAAGGCG TGCGCGAGTT GGCAGGCGCC GGGGTGTCGG GCCGGGTCCG GTCTGACAGC
GCCGGCGGTG CACCGATTGA GCTGCGGCTG GGTTCTGCTG ACTTCTGTGG TGTTGAGATT
GCCCGGCCAG ACACCTTGCA GGCCTGCCTG AGCGACGCGC AGGGCTGGCT GGCGACTTTT
GAATTTCATG AAGATCTGCG ATCGGATGCG ATCGCGACGG TGGCGGCCCT GCAGGGTGCG
GGCATCGCGG TGCACCTGTT GTCAGGCGAT AGTCTGTCGG CCGCGGCCAG GGTTGCCGCT
CAGGTTGGCA TCACAGCGTT CAAGGGCGCC TGTTCACCGC AGGACAAGCT CGATTTCTTG
CGTAGTGCCC AACAACAGGG GCACAGGGTG GCCGTCGTGG GGGATGGTCT TAATGATGGC
CCGGTGCTGG CCGGCGCCCA CGTGTCGTTC GCCTTTGGGC AGGCGGTGCC ATTGGCGCAG
GCGCAGGCGG ACTTTATTGT GCTGGGTGAT CAAATCGGTG CGGTGGCGCA AGCGCTGAGT
CTGGCTCGTC GTACCCTGCG TGTGGTGCGG CAAAATCTCT GGTGGGCGGC CGGGTACAAC
GCGGTGTGTG TGCCGCTGGC TATGGTGGGG TGGATGCCAG CTTGGCTGGC GGGTCTGGGT
ATGGGCATGA GTTCCTTGTT GGTGGTACTC AACGCCTTGC GGTTATCCTA TGGTGCGAAG
CCTGCAAAAA CACCCCTGCC TTGCCATGAC TTGGCGGGTG TGCAATGA
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| Protein sequence | MSIASPAVAV AAPPVPINPD DSSPAQAPGS EAAVERLRLL DDPQEWSAFS RPDVKRANYW
ESNILIEGMH CAACALTLED ALLGVPGVVT ADVSAGSHRA RVVWSADAVR PSDWMGAVQA
AGYRAVPAND AFARERRKTE ARKALWRLLV AGLCMMQVMM YAYPAYVAEP GDLTAEMEQL
LRWASWVLTL PVVLFSCGPF FGSAMRDVLH RRISMDLPVA LGMLITFAVS TAGTFEPLGI
FGREVYFDSL TMFVFFLLSG RWLELRLRDR TAGALEVLMN RLPDSVARRA GDGTYERVPV
RRLVAGDVMR ILPGETFPAD GVVLQGETTV DEALLTGESR PVARGVGAAV IAGSHNLSTV
VQVRVERLGH QTRFAQIVAL MESASTTKPP IARLADRIAK PFLLAVLLAA GLAAAFWWGR
GPGHALMVAV AVLVVTCPCA LSLATPAAML AAAGTLARRG VLVRRLEAFE ALAAIDTVVF
DKTGTLTRDA MVLGDVQTRA GVAPEQALAM AATLAHYSLH PVSRALVLAA VGAASSAPWQ
AEGVRELAGA GVSGRVRSDS AGGAPIELRL GSADFCGVEI ARPDTLQACL SDAQGWLATF
EFHEDLRSDA IATVAALQGA GIAVHLLSGD SLSAAARVAA QVGITAFKGA CSPQDKLDFL
RSAQQQGHRV AVVGDGLNDG PVLAGAHVSF AFGQAVPLAQ AQADFIVLGD QIGAVAQALS
LARRTLRVVR QNLWWAAGYN AVCVPLAMVG WMPAWLAGLG MGMSSLLVVL NALRLSYGAK
PAKTPLPCHD LAGVQ
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