Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1904 |
Symbol | |
ID | 3963233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2044467 |
End bp | 2045477 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916724 |
Product | PfkB |
Protein accession | YP_523161 |
Protein GI | 89900690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0331042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACC CTTACATGCT GCAAATAAAT TCTTCTATTC AAGTGGCCAC GGCGGGCGAG GCCCTGATTG ATTTCATTGC CCACGCCGAT GGCCGGTTTG AGCCCTGCCT GGGTGGTGCG GTCTACAACC TCACCAGGGC GCTGGCGCGT CAAGGGATAG GCACGCTGTA CCTGAATCCC TTGTCACGGG ATCGTTTTGG TCGACGGCTG GCGCAAGGTT TGCTGGAAGC TGGGGTGCAT CTGGCGGTGC CGGAGGCGGT GCCACAGGTC ACTTCATTGG CGGTGGTGAA TGTCGATGAA CAGGGCCACC CGGACTATGC GTTTTACCGC GAGGGCGTGG CTGACCGCGC CACCTCGGCC GCGGCACTGA AGCAAGCGTG CAGCAGGGTT GAAACCCTGT CGCTGGTGTG CACCGGCGCG CTGGCGCTTT CCCCCGATGA TGCCGAGACC TATCTGCCGT GGCTGGCCGC GCAGCGCCAG GCTGGACGCA CCGTGGTGAT TGATGCCAAT TTGCGCCCGT CGGTCATGCC CCACCAGGAG CAATACCGCC GCCATGTGCT GACCGCGCTG CAGTTCGCCG ATGTGATCAA AGCCAGTGAC GAGGACCTGG CTGGCCTGAA TTTGCCCGGA GCCGGCGCTC TGGCCCAGGC GCAACACCTG CTGCAAAGCA GCCGAGCCAG CGTGCTGGCG CTTACCCTGG GCGCGCAGGG GGCCGCGTTG CTGACGCGTG CGGGTCAGGT GTTTCAGGCG CGCGAGTTGG AGCCTGTAGC GGTCGTGGAC ACCGTGGGTG CGGGCGACTG CTTTCTGGCC GGGCTGGTTG CGGCCATGCT GGGGCACGAG TTGCCTGCGG ATTGGGGAAG TGCGTTCGTT TCTGAAGAGG TAGCCAAGAA GCTGCTGGGC GGCGCCATTG CCAGCGCCAG TTTGTGTGTG ATGCGCCGCG GGTGTGTGCC GCCTACGCGT TCGGAAGTGC TGGCCCGGCT TGAATCCGTT GCGATGTCGT TTACGTGTTG A
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Protein sequence | MENPYMLQIN SSIQVATAGE ALIDFIAHAD GRFEPCLGGA VYNLTRALAR QGIGTLYLNP LSRDRFGRRL AQGLLEAGVH LAVPEAVPQV TSLAVVNVDE QGHPDYAFYR EGVADRATSA AALKQACSRV ETLSLVCTGA LALSPDDAET YLPWLAAQRQ AGRTVVIDAN LRPSVMPHQE QYRRHVLTAL QFADVIKASD EDLAGLNLPG AGALAQAQHL LQSSRASVLA LTLGAQGAAL LTRAGQVFQA RELEPVAVVD TVGAGDCFLA GLVAAMLGHE LPADWGSAFV SEEVAKKLLG GAIASASLCV MRRGCVPPTR SEVLARLESV AMSFTC
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