| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1874 |
|---|
| Symbol | |
|---|
| ID | 3962252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2013194 |
|---|
| End bp | 2014075 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637916694 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_523131 |
|---|
| Protein GI | 89900660 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAC TGAACGTTGC CAAACACGGC AACTCTGTCC TGCTGCTGGC TGGTGTCGCC
GCCGTGGTGT CGATGATTAT CAGTCTGTTG GCGATCTTCA TGTATTGGCG CCAGCGTTCA
GTGATTGACA AGCTGCGACA GGAGTTGCAA CGCACCGTTC AGGTCGGACG TGATCGACTC
GAAACCGAGG TCGCGCTTCG CACGGTGCAA CTGACCGAGT TGACCCACCA TCTGCAGACT
GCGCGAGAAG ACGAGCGTCA TCGCCTGGCG CGTAATTTGC ACGATGATTT GGGTGCATTG
CTGACATCGG CCAAGCTTGA TGCGGCCCGC ATCAAATCGC GCCTGGCAGA CCGGGCACCC
GAGGCGCTGG AACTGTTGGC ACATCTGGTT AGCACACTCA ACAGCGGCAT TGCACTCGGG
CGCAGCATCA TTGAAGACTT GCGCCCGTCC GCCCTGAGCA ATCTGGGCTT GGTGGCGACG
CTCGAAATTC TGACGCGTGA GTTTGCTGAA ATCTCAGGTG TCGCAGTTCA TTGCGAACTG
GAGCCGGTAG AGCTTGAAGT CAGTGCCGAG CTGATGGTTT ATCGTCTGGT GCAAGAGGCC
ATTACCAATA TCACAAAGTA TGCCCGAGCG CAGAATGTTT GGGTGCGCTT GGCCACAGAC
AATGGCCAGG TGGAAGTCTC GGTTCGTGAC GATGGGATTG GCTTTGATAC CAGCGTGCAG
CCGCGTTCTG CCTATGGCTT GGTGGGTATG CGTTTTCGGG TTGAGGCCGA AGGCGGAACC
CTGGCCTTGG TATCGGCGCC GGGGCAGGGC ACGTTGATTC AAGTGAACCT GACGCCAGTG
CACGGGCGAC ACGACCGTAG AAACAACGCA AGGCCAAGCT GA
|
|---|
| Protein sequence | MDVLNVAKHG NSVLLLAGVA AVVSMIISLL AIFMYWRQRS VIDKLRQELQ RTVQVGRDRL
ETEVALRTVQ LTELTHHLQT AREDERHRLA RNLHDDLGAL LTSAKLDAAR IKSRLADRAP
EALELLAHLV STLNSGIALG RSIIEDLRPS ALSNLGLVAT LEILTREFAE ISGVAVHCEL
EPVELEVSAE LMVYRLVQEA ITNITKYARA QNVWVRLATD NGQVEVSVRD DGIGFDTSVQ
PRSAYGLVGM RFRVEAEGGT LALVSAPGQG TLIQVNLTPV HGRHDRRNNA RPS
|
|---|
| |