| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1852 |
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| Symbol | |
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| ID | 3963027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1992481 |
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| End bp | 1993491 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916672 |
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| Product | patatin |
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| Protein accession | YP_523109 |
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| Protein GI | 89900638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCA GCATCAACGG GCAACAACGC AGAATCGGGC TCGCTTTGTC CGGTGGCGGT
TTCCGGGCGG CAGCCTTCCA TCTGGGGGTC ATGCGAAAGC TGCAGAGCCT CGGGCTGTTT
GCATCCATTG ACCTGCTGTC ATGCGTGAGT GGCGGCAGCA TCGCAGGCGC CTTTGTGGCG
CTGAACTGGG GCAAGGCATC GGTCCTGGAT GAGCTCGAAA ACTACCTGGC CACCCGCTCC
ATCGCCGTCA GCTCCGTCAT CGGCGGCATT CTTGATCCGT TCGAGAGTCG CCTGGACAAG
CTGGCCGGCA CCTATGACCG CGACCTCTTC AAGGGGGCCA GGTTGAGCGC GCTTCGCGGC
GGGCCGCGGA TCTATCTCAA CGCCACCAAC CTGGCGACCG GCAACATGTT TTTCTTTGTC
GCCGGGGGCG CTGGTCCGGA AGAGATGGGG GAGCATGAAC TTGGTGTCGT GCCAGGCCCC
GATTTCAGCC TGGCAAGAGC GGTGGCCGCA TCGTCGGCGT TCCCGCCTGT GTTTCCTCCG
CTGCGACTGG AGTCCCCGGA ATACATCCCG GCCTCTCAAG TTGACTATGT CACGCTGGCC
GATGGGGGTG TTTACGACAA CATGGGCGTG AATCCGACCC TGCGTGCGCG CAACGCGCTC
GACTACCTGA TCGTCAGCGA TGGCGGAAAG CCCTTTGCCA ATGATGCACA GCCTACCGAG
TCCGGCGCCA TGGTTTTGAA GGCGGCGCTC GACATCATGA TGGAACAGAT TCGGGGGCTT
GAGTTCGACC GCATGGAGCA TCGGCATAAA GCCGGCCTCG GGCCCAAGCC CATGTGGTTC
TCGATCGACA GCGTGGTCGG GCAAGCGCAA GACGGTGATG CGCAGTTTGC CGGTTCTATT
GCGACAAATC TCATGGCGCT CAATGCGGCG CAAAGAGCGG TGCTGATTCG TCATGGCGGT
GCCCTCGTGG AATCGCGCAT CAGGGGCTAT GCGCCCGAGC TGATTCAATA A
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| Protein sequence | MSISINGQQR RIGLALSGGG FRAAAFHLGV MRKLQSLGLF ASIDLLSCVS GGSIAGAFVA
LNWGKASVLD ELENYLATRS IAVSSVIGGI LDPFESRLDK LAGTYDRDLF KGARLSALRG
GPRIYLNATN LATGNMFFFV AGGAGPEEMG EHELGVVPGP DFSLARAVAA SSAFPPVFPP
LRLESPEYIP ASQVDYVTLA DGGVYDNMGV NPTLRARNAL DYLIVSDGGK PFANDAQPTE
SGAMVLKAAL DIMMEQIRGL EFDRMEHRHK AGLGPKPMWF SIDSVVGQAQ DGDAQFAGSI
ATNLMALNAA QRAVLIRHGG ALVESRIRGY APELIQ
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