Gene Rfer_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1819 
Symbol 
ID3961060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1952849 
End bp1953775 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID637916642 
Productrestriction endonuclease 
Protein accessionYP_523079 
Protein GI89900608 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGT CAAAGTCCAA CAAGCGGCAG AAGCGTGCAG TCAATACATT GCAGGAGAAA 
GGCATTGGGC TTTGCGCTCT GGGCCTTGGG TTTCTGATCA TTCCCTGGTT CATCGGCTCT
TCGCCGATGC TCAAGGTCGT CGCGGCGGGC CTTCGCACTC CTGGCTGGTT GGCATTGGCG
GCAGGGGTGG TGCTGTTGGG CATTCACCAT GTGACCCAGG CCAAAATCGC AAAAACCAAT
CCCCTGCCCC AACTCACTCC GCGCGCACCC ACACCTACGG AAAGAACAGT GCTGCAAGGC
ACTAAGGATG ACATTGCTGC GCACCGGCGC GCGCCAAGCG CTGCAGCACC CCCAACACGG
CAGGTCGCAA CCCGCTGGAG CCCCGCCGTC TTTGCCGCCA TCGAGTGGCG CCGCTTTGAA
GCCGTGTGTG AAGCGCTGTT TGCCCAAGCC GGGTTTGAAA CACGCTCGCA ATCGCACGGC
GCAGACGGCG GCGTGGACAT CTGGCTGCAC TCGGCCAATG CGCAAGGCCC GGTGGCCGTG
GTGCAGTGCA AGCACTGGCA GGGCAAGGCG GTGGGGGTGA AAGAGATCCG CGAGTTCTTT
GGCGTGATGG CCTCGCACCA ACTCAAGCGC GGCACCTACG CCACCACATC CACCTACACG
GCGGACGCGC AGCAGTTCGC CAAAGCCAAC GGCATCAACG CCATGGACGG CCCTGCCCTG
CTGGCATTGA TTGCCAAACG CACGCCGGAG CAACAGCAGG CCTTGCTGGC TGTGGCGCAT
GAAGGCGAAT ACTGGCGCCC CACCTGCGCG AGTTGTGGCA TCAAGCTGGT GGAGCGCACA
CCAGCCAAGG GTGGCCCTGC GTTTTGGGGC TGCAGCAACT ATCCGCGCTG CAAGTCCCGC
TTGCCGATGG TGGCTGCGAT GCGATAA
 
Protein sequence
MARSKSNKRQ KRAVNTLQEK GIGLCALGLG FLIIPWFIGS SPMLKVVAAG LRTPGWLALA 
AGVVLLGIHH VTQAKIAKTN PLPQLTPRAP TPTERTVLQG TKDDIAAHRR APSAAAPPTR
QVATRWSPAV FAAIEWRRFE AVCEALFAQA GFETRSQSHG ADGGVDIWLH SANAQGPVAV
VQCKHWQGKA VGVKEIREFF GVMASHQLKR GTYATTSTYT ADAQQFAKAN GINAMDGPAL
LALIAKRTPE QQQALLAVAH EGEYWRPTCA SCGIKLVERT PAKGGPAFWG CSNYPRCKSR
LPMVAAMR