Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1769 |
Symbol | |
ID | 3960860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1905200 |
End bp | 1906057 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916592 |
Product | hypothetical protein |
Protein accession | YP_523029 |
Protein GI | 89900558 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.23774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGCTGA AGATTTTTCT CATTGTCATC CTTGCTCTTG TCGTCATTTT CTTGGTGGCC GTGGGCTATG GCGGATTTCG CTGGGAAGAT GGCACTCGGG AACTGCGGGC GCGCCTGGAC GCGGCTCGCG TTCCTCTGCA CCCGCAGGTG GTCGATTTCC GAGAACTCGA TAACCTGCCC CCGCCCGTCA AACGATTTTT CCGCAAGGTA CTGAAAGACG GGCAGCCGAT GGTGGCTGGC GCAAGGGTTC GGCACAGCGG TACTTTCAAC ATGGGCGAAG CGACCGACCG ATGGAAGTCA TTCACGTCGA GCCAGCAGGT CATCACCCAA CGACCGGGAT TCGACTGGGA CGGCCGAGTC AGCCTGATGC CGGGCTTTCA AGTGCGGGTG CACGACGCCT ATGTGGCCGG TGAAGGCATC CTGCACGCCG CTTTGTTCGG GCTGTTTTCA ATGGCCAAGC TGCGTGGCAC CGGCGATGTG GCCAAGGGCG AACTGATGCG CTTCTTCGCT GAGGCAGCCT GGTACCCCAC GGCGCTGCTG CCCAGCCAGG GTGTGCGCTG GGATGCAGTG GATGATCACT GTGCTCGCGC GACTCTCACC GAAGGCAGTA TCGCTCTGAC AATGCTCTTC ACCTTCAACC CGCAGGGGCT GATCGACACC GTGCGCGCCG AGGCGCGCGG ACGCACGGTG GGTGGCGCGG TGATTCCGAC ACCCTGGCAA GGTCGCGTCT GGAACTATGA AGAGCGTGGC GGTATGCAGG TGCCGCTCGA TGCAGAGGTC GCATGGCTGC TGCCCGAGGG CGCAAAGCCC TACTGGCGTG GTCACATCAC CAAGATCGAC TATGAATTCG AGCGCTAA
|
Protein sequence | MGLKIFLIVI LALVVIFLVA VGYGGFRWED GTRELRARLD AARVPLHPQV VDFRELDNLP PPVKRFFRKV LKDGQPMVAG ARVRHSGTFN MGEATDRWKS FTSSQQVITQ RPGFDWDGRV SLMPGFQVRV HDAYVAGEGI LHAALFGLFS MAKLRGTGDV AKGELMRFFA EAAWYPTALL PSQGVRWDAV DDHCARATLT EGSIALTMLF TFNPQGLIDT VRAEARGRTV GGAVIPTPWQ GRVWNYEERG GMQVPLDAEV AWLLPEGAKP YWRGHITKID YEFER
|
| |