Gene Rfer_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1737 
Symbol 
ID3964036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1872584 
End bp1873228 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID637916560 
Productanti sigma-E protein RseA 
Protein accessionYP_522997 
Protein GI89900526 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.27797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAG AAGTTGCGAA AAATCGTGAA TTGATATCGG CACTGGCCGA TGGACAGTTG 
CGCGACGAGG ATTTCGCGCG AACGGTCGAA TGGGTCAATC AGACTGAAGA GGCCCGACTC 
ACCTGGCACA CCTATCATCT GGTGGGCGAT GTGTTGCGCT CGGGTGAGCC GGTGGTGAGT 
GCACGCGACG CTGATTTTCT GCAAAGTCTG AAGTTGCGCT TGCAGCAGGA GACGCCGCAA 
GTGCGCCCTG TGAATGCTCC TGAATTGGTA GCTAATGATC CAGGTATGAC GGTGGCTGGA 
GTCCAGAATG GCTCAAAATA TTGGAGCGCC AACGACGGTC GCTTCCGCTG GAAAATGCTG 
GCTGGCTTGG CATCCTTGTC GACGGTCGCG CTCATTGGCT GGCAAATTGT CAGCGGCTGG 
GGCGATCCGG GCGGGGCGCG GCAGCTCGTG CAGGTGCCAG TTCAGGCGCT CCAGCCCGAG 
GTCGGGTTAA CGCAGCCTGG CGTCGGTGCA GAGCCGCAGC GCATGATCCG CGACCCGCAA 
CTTGATGCGC TGCTGGCGGC ACACAAACAA TTTGGCGGCA CGTCTGCGCT GCAGGGACCG 
GCTGGGTTTC TTCGTAACGC CACGTTTGAG GGAGGTGTCC CTTGA
 
Protein sequence
MMQEVAKNRE LISALADGQL RDEDFARTVE WVNQTEEARL TWHTYHLVGD VLRSGEPVVS 
ARDADFLQSL KLRLQQETPQ VRPVNAPELV ANDPGMTVAG VQNGSKYWSA NDGRFRWKML 
AGLASLSTVA LIGWQIVSGW GDPGGARQLV QVPVQALQPE VGLTQPGVGA EPQRMIRDPQ 
LDALLAAHKQ FGGTSALQGP AGFLRNATFE GGVP