| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1680 |
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| Symbol | |
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| ID | 3960429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1810240 |
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| End bp | 1811448 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637916504 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_522941 |
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| Protein GI | 89900470 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.450721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGC GCATTTTCAG TAAATTGGCG GCCACATTGT TGGTCGCAAG TGCCTGGGCA
GGTACGGTTG CCTTCACGGC GGCGCAGGCC GTCAGTGATT TGCCGGGTGG CCCGGCGGTG
CGGCAACTCA ATTTGCACCC GCCCGTCACC AAAATTGCCG AAGAACAGGC TTGGCTGCAT
TGGTTCATGT TGATTCTTTG CACGGCGATT TTTGTTGCCG TGTTCGCGGT GATGTTTTAT
TCCATCTGGA AACACCGCAA GTCGGTGGGG CACAAGTCAG CCAATTTTCA TGAATCGGTG
ACCGTCGAGA TTGTCTGGAC GATCGTGCCT TTTGTCATTG TGATCTTGAT GGCGCTGCCG
GCCACCAAAG TGGTGGTGGC CATGAAAGAC ACCACCAATG CCGACCTCAC CATCAAGGTC
ACCGGCATGC AATGGAAGTG GGGCTACGAT TACCTCAAGG GCGAGGGCGA AGGCATCGGC
TTTCTCTCGG CGCTGGACCG CACACAACGC GAAATGTCAA ATAATGGCGG TCCCAAAGCG
GGCGAGCAGG TGGAAGATTA CCTGTTGAAA GTCGATCACC CGATGGTGGT TCCCGTCAAC
AAAAAGATCC GCCTCATCAC CACTGCCAAC GACGTGATTC ACTCCTTCAT GATTCCCTCG
TTTGGCATCA AGCAGGATGC GATTCCCGGC TTTGTGCGCG ACACCTGGTT TCGGGCGGAA
AAAATCGGCG ACTATCACGG CCAGTGTGTT GAGTTGTGTG GCAAGGAGCA CGCCTACATG
CCGATCCATG TGAAGGTGGT GTCAAGCGAG GATTACACCC TGTGGGTCAA TGAAGAAATG
AAGAAGCTGG CCGCGCTGGC CGACGATCCC ACCAAGGTCT GGACGGCAGA AGAATTGTTT
GCCCGCGGTG AAAAAGTTTA CGCTGCCAAT TGCGCCGCCT GCCATCAGCC CAACGGCAAG
GGTGTGGGCA CAATCAAACC GCTTGATGGT TCTGCCGTGG TGCTTGATGC AGACAAGGGT
CAACAACTTA CCGTGCTGCT CAATGGCCGC ACGGTGGCGC TGCCCGACGG CAAGACCAAT
GTGATGCCCT CATGGAAGCA GTTGAGCGAC ACCGAGATCG CTGCGGTCAT GACGTACACC
AAAAATAACT GGTCCAACAA GACCGGCCAA CTGGTTCAGC CGTCTGATGT GACGGCGGCG
CGCAAGTAA
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| Protein sequence | MMKRIFSKLA ATLLVASAWA GTVAFTAAQA VSDLPGGPAV RQLNLHPPVT KIAEEQAWLH
WFMLILCTAI FVAVFAVMFY SIWKHRKSVG HKSANFHESV TVEIVWTIVP FVIVILMALP
ATKVVVAMKD TTNADLTIKV TGMQWKWGYD YLKGEGEGIG FLSALDRTQR EMSNNGGPKA
GEQVEDYLLK VDHPMVVPVN KKIRLITTAN DVIHSFMIPS FGIKQDAIPG FVRDTWFRAE
KIGDYHGQCV ELCGKEHAYM PIHVKVVSSE DYTLWVNEEM KKLAALADDP TKVWTAEELF
ARGEKVYAAN CAACHQPNGK GVGTIKPLDG SAVVLDADKG QQLTVLLNGR TVALPDGKTN
VMPSWKQLSD TEIAAVMTYT KNNWSNKTGQ LVQPSDVTAA RK
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