| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1673 |
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| Symbol | |
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| ID | 3960422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1804999 |
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| End bp | 1806030 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916497 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_522934 |
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| Protein GI | 89900463 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAC TCGTTGATAA GTTAGCCGAC CTGACCGACC TTCGGGATCG CGGTGCGCTC
GACCTCGCCC TGGTCAGTGC CATTCATGAC TTGTTGCAGC CGCAGACCGC AGCGATCTGT
CGCGTTGTCG GTGAAGCCGG CAATGAGCGC TGGTTGACCA CCGCCCAGAT CAAGGCCGAT
CAACGGGTGC CCGTATTTGA CTCGGCTTGG TCCGATTTGC TGGCACTGCC ACGTTTGGCT
GAGTACCCGC TGCGCCAGCA GGCCGGCGTC GGCAAACTGG TGATGCAGTC AAGGCTATAT
CCCGGCATCA CGGTATTTCC GGTGAGCAGC AGCCCGGGTA CGATCGGTGT GCTTGAAATC
GCCACCCAGG AGCCGCTGTC TGAGGAACTG AGTCGATTGG TCAGTGGCGT GCTGCGCCTG
TACCTCAATT TTCAAAGCCT GCTCGACTAT GGCGAGCGCG ATGCACTGAC CGAGCTGCTC
AATCGCAAGA CCTTTGATGG TGCCTTTCTC AAGGCAACGC TGGCGCAGCA AGTCGCCGTC
GATGGCGCGC CCGACAAGCG GCGCGACACC AGCTGCAGTG GCAGCTTCTG GCTGGCGATG
ATTGACATTG ACCATTTCAA GCATGTCAAT GACAACTTCG GGCACCTCAT CGGCGACGAA
GTGCTGCTGC TGCTGGCACG CTTGATGCGC GTCAGTTTCC GCTTTCACGA CCAGCTCTAC
CGTTTTGGGG GGGAAGAGTT TGTGGTGCTG ATGCGCTGCA ATGGCGAGGC AGAGGCGGCT
GCCGCGCTGG AGCGGCTAAG AACCAACACC GAAAATTACC TGTTTCCCCA GGTTGGCAGC
ATCACCATCA GCATCGGTTT TTCTGAAATC AAAACCGGCG ACACCCCCAG TGGCGCCTTT
GAGCGCGCCG ACAAGGCGGT TTACTATGCC AAGGAGCATG GCCGCAACCA GGTGTGCAGC
CATGCCGCCC TGGTTGCCAG CGGTGTGCTG GTGGAGCAGG CCGCCAACGT CGGCGACATG
GAATTGTTTT GA
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| Protein sequence | MSQLVDKLAD LTDLRDRGAL DLALVSAIHD LLQPQTAAIC RVVGEAGNER WLTTAQIKAD
QRVPVFDSAW SDLLALPRLA EYPLRQQAGV GKLVMQSRLY PGITVFPVSS SPGTIGVLEI
ATQEPLSEEL SRLVSGVLRL YLNFQSLLDY GERDALTELL NRKTFDGAFL KATLAQQVAV
DGAPDKRRDT SCSGSFWLAM IDIDHFKHVN DNFGHLIGDE VLLLLARLMR VSFRFHDQLY
RFGGEEFVVL MRCNGEAEAA AALERLRTNT ENYLFPQVGS ITISIGFSEI KTGDTPSGAF
ERADKAVYYA KEHGRNQVCS HAALVASGVL VEQAANVGDM ELF
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