| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1634 |
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| Symbol | |
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| ID | 3964163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1764009 |
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| End bp | 1766111 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916457 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_522895 |
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| Protein GI | 89900424 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACG CCGCAAATGA CACGCCGCAG GGCCTGTTCG ACCATCCTGC ACCAACCGAT
GAATTCCAGG AGCACGGTCA TACCCGCAAT CTCGGCGGGT GGGCGTTGAA GACCGTGGTC
TTTGCCGCCA TCGCTTTTTC CGCTTACCAG TTGATGGTGG CCGGGTTCTC ACCGTTGTCC
AGCCTCATCA CCCGCGCGTT CCACGTCGGC TTCCTGCTCC TGATCGCTTT CCTGCTCTAT
CCTGCCCTGC AGCGCGCCAA GCCGCAGACC CGCATCCCCT GGTACGACTG GATTCTGGCG
CTGACCGGTT TCGGCCTCGC CTTCTACCAC TGGATTTTCG AGGCTGACCT GATCCAGCGC
TCGGGCGATC CGACCATGAC CGATCTCGTC GTCGGCGCCA TTGTGGTTCT ACTGGTATTC
GAGGCCGCCC GGCGCATCCT CGGCATCGCA CTGCCCATCG TTTGCGGCCT GTTCCTGCTC
TATGGCCTGT TTGGCCAATA CCTGCCGGGC GATCTGGCCC ATCGGGGCTA TACCCTGGCG
CAACTTGTGG ACCAGCTTGG CTTCGGCACC GAAGGCATCT ATGGCATCCC GACGCTGGTG
TCGGCCACCT ATATTTTCCT GTTCATCCTG TTCGGTTCCT TCCTTGAACA CGCCGGCATG
ATCAGGCTCT TCAATAGCGT GGCGCTGGGC TTCGTCGGCC ATGCCCAGGG CGGACCGGCC
AAGGTGGCGG TGATCTCCTC CGGCTTCATG GGCATGATCT CGGGCTCGGG CGTCGCCAAC
GTGCTCACCA TCGGCCAGTT CACCATCCCG CTGATGAAGC GCTTCGGCTA TTCGTCCGTC
TTCGCCGGCG CCGTCGAGGC CACCTCCTCG ATGGGCGGCC AGATCATGCC GCCGGTGATG
GGCGCGGTCG CCTTCATCAT GGCCGAAACG CTCAACGTGC CCTACGCCGA CATCGTCAAG
GCTGCGGTGA TCCCGGCCTT CCTCTATTAC TTCACGGCCT TCGTCATGGT GCACCTGGAG
GCCGGCCGCC TGAAGCTGCT CGGCATCCCC AAGGACCAGT GCCCGAATCC CTGGCGCGCC
ATCAAGGACA ACTGGTACCT GATCCTGCCG CTGGCGGCAC TGGTGGTGAT GCTGTTCGAA
GGCTTCACGC CGATGTTCGC GGGCATGATG GGCCTGGCCC TGACGGCCAT CCTGATTCTG
GGCAGCGCCA TCGCCGCGCG CATTTCACAA ACGGCATTCC GCGTCGTGTT CTGGTTCGCG
ATGGGCCTGG CAGCCGCCTC ATTCGCCAAA TGGGGCATAC AGCCAGTAAT GGCGGTGATC
GCCGCGCTCG CGGTCGGCAA CCTGTTCGTC CAAGGCGGCA AGAAGACCCT GCACACCATG
AAGATGAGCC TGGTCGACGG CGCCAAGCAG GCGCTGCCGG TGGGTATCGC CTGCGCCGTC
GTCGGCGTCA TCATCGGCGT CTTGACTCTG ACCGGGGCGG CCTCCAGCTT CGCCGGCTAC
ATCCTGACCA TCGGGCAGAA GAGCCTGTTC GCCTCGCTGT TCCTGACCAT GATCGTCTGT
CTGATCCTGG GCATGGGCAT CCCGACCATT CCCAATTACA TCATCACCAG CTCCATTGCC
GCCCCGGCCC TGCTCAAGCT CGGCGTGCCG CTGATCGTCT CGCACATGTT CGTGTTCTAT
TTCGGCATCA TGGCCGATCT GACGCCGCCG GTGGCGCTGG CCGCCTTCGC CGCTGCCTCG
ATCGCCAAGG CCTCGCCGAT GAGGATCGGC TACAAGGCCA CCCAGATCGC CATCGCCGGT
TTCGTCGTGC CCTTCATGGC GGTCTACGAC CCGGCGCTGA TGCTGCAGGG GCAATGGACC
GCTCTCACCG TGGCCTACGT CGCTTTCAAG GCGGTGCTCG CCATCAGCCT GTGGGCCGTG
ATGACCATCG GCTACCTGTG GCAGCCCGTC GGATTGCTCT GGCGCGTTTT TGCCTTCGTC
GCCGCCGCCC TGCTGGTGGC CGCCATCCCC TTCACCGACG AAATCGGCTT CGCCATGGCA
GCCGTATTTA TCATTTGGCA GTGGTTCAGG AATCGCAAGG CACCCCAATT AGCAGTTGCA
TGA
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| Protein sequence | MTNAANDTPQ GLFDHPAPTD EFQEHGHTRN LGGWALKTVV FAAIAFSAYQ LMVAGFSPLS
SLITRAFHVG FLLLIAFLLY PALQRAKPQT RIPWYDWILA LTGFGLAFYH WIFEADLIQR
SGDPTMTDLV VGAIVVLLVF EAARRILGIA LPIVCGLFLL YGLFGQYLPG DLAHRGYTLA
QLVDQLGFGT EGIYGIPTLV SATYIFLFIL FGSFLEHAGM IRLFNSVALG FVGHAQGGPA
KVAVISSGFM GMISGSGVAN VLTIGQFTIP LMKRFGYSSV FAGAVEATSS MGGQIMPPVM
GAVAFIMAET LNVPYADIVK AAVIPAFLYY FTAFVMVHLE AGRLKLLGIP KDQCPNPWRA
IKDNWYLILP LAALVVMLFE GFTPMFAGMM GLALTAILIL GSAIAARISQ TAFRVVFWFA
MGLAAASFAK WGIQPVMAVI AALAVGNLFV QGGKKTLHTM KMSLVDGAKQ ALPVGIACAV
VGVIIGVLTL TGAASSFAGY ILTIGQKSLF ASLFLTMIVC LILGMGIPTI PNYIITSSIA
APALLKLGVP LIVSHMFVFY FGIMADLTPP VALAAFAAAS IAKASPMRIG YKATQIAIAG
FVVPFMAVYD PALMLQGQWT ALTVAYVAFK AVLAISLWAV MTIGYLWQPV GLLWRVFAFV
AAALLVAAIP FTDEIGFAMA AVFIIWQWFR NRKAPQLAVA
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