| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1621 |
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| Symbol | |
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| ID | 3960485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1753133 |
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| End bp | 1755283 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637916445 |
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| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation protein |
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| Protein accession | YP_522883 |
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| Protein GI | 89900412 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TATTAATTCT TAGCGCTGCT GCCTTGTTGG TATTCGGTTT CTTTGCACTG
GATTTGAACC GCTACCTGAC ACTCGATGGC ATGAAAGCCA GTCTGGGTCA ATTTGAGTCG
CAACGTGCCG CGTCACCCGT TGTGGTTGGG CTGGTCTTCT TTTCAGTCTA CGTGGTGGTC
ACAGCGATGT CACTGCCGGG TGCTGCGATA TTGACCCTTG CTGCCGGTGC TTTGTTTGGC
TTGTCCATGG GCACGTTGAT TGTGTCGTTT GCGTCAAGCA TCGGCGCTAC CCTGGCTTTT
CTGGCATCAC GCTACGTGTT GCGCGATGCC ATCCAGCGCC GTTTTGGTGA TCGGCTCAAA
GTCATCAACG AAGGCATGGC CAAAGATGGC GCGCTGTATC TGTTCACGCT GCGTCTGGTG
CCCCTATTTC CGTTCTTCCT GGTCAATTTG CTCATGGGCC TGACACCGGT TCGTACACTG
AGCTACTACT GGGTCAGCCA GGTGGGCATG CTGGCTGGCA CCCTGGTTTA TGTGAATGCC
GGCACCCAAC TGGCCCAAAT CAACAGCTTG GTCGGTATTG TGTCGCCCGG CCTCTTGCTT
TCCTTTGCAC TACTGGGCGT ATTCCCCATG CTGGCCAAGA TGTTTATGCG TTTGCTGCAA
GGTCGCCGCG TGTATGCCAA ATGGCAACGC CCCAAAAAAT TTGACCGCAA CTTGGTGGTC
ATTGGTGGCG GCGCGGCAGG TTTGGTTACT TCCTATATTG CGGCAGCCGT CAAGGCCAAG
GTGACCTTGG TTGAAGCCCA CAGGATGGGG GGTGACTGCC TCAACTACGG CTGTGTACCC
AGCAAGGCCC TGATCAAGTC AGCCCGCATC GCCAATCAAA TGCGCCATGC CGAAAGTTAT
GGCCTGAGTG CAGCAGAACC ACAGTTCAGT TTTCGCAAAG TGATGGCCAG AGTGCATGAA
GTGATACGCA CGGTGGAGCC ACACGACAGC GTGGCGCGCT ACACCGAACT CGGAGTGGAA
GTGCTGGAGG GTTATGCACG CATCGTCGAC CCCTGGACAG TGGAAATCAA GCTCAACAAC
GGCGGCATGC AGCGCCTGAC GACCCGCAGC ATCGTCATTG CAGCCGGGGC CAGCCCGTTT
GTGCCACCGC TGCCCGGTCT GGCTGATGTG GGTTATGTCA CCAGTGACAC GCTGTGGGAC
GAATTTGCCA AGCTGGACGC GGCCCCAAAG CGACTGGTGG TGCTGGGCGG TGGCCCCATT
GGCTGCGAGT TGGCGCAGAG TTTTGCCCGT TTGGGCTCCA AGGTGACTCA AATCGAGATG
GCTCCGCGCA TCATGATCCG CGAAGACCTG GAAGTCTCCG ATCTGGCCCG TGACTCATTG
AGGCGCGATG GCATTGACGT TTTGACAGGT CACAAAGCCC TGCGATGCGA GCGGGAGGGG
ACTCGCAAAT TCATCGTGGC TGAGCATCAG GGCAAAGAGA TACGCATCGA ATTTGATGCC
TTGCTGTGCG CGGTCGGGCG CGTGGCCCGT TTGCAGGGCT ATGGCCTGGA AGAGCTGGGG
ATTCCCACCC AACGCACCGT GGCGGTTAAC GATTACCTGG AGACCCTGTA CCCGAACATC
TATGCGGCCG GCGATGTGGC CGGGCCTTAT CAATTTACCC ACACGGCTGG CCACATGGCG
TGGTACGCCG CTGTCAACGC GCTGTTCGGC GACTTCAAGA GATTCAAGGT GGATTACTCA
GTGGTGCCCT GGGCGACTTT CATCCAACCC GAGGTGGCTC GGGTTGGACT CAACGAGCAA
GATGCCAAGG AGAAAGGCAT TGCTCATGAA GTTACCAAAT ACGGCCTGGA TGACCTGGAC
CGCGCCATTG CCGACGGCAC GGCGTACGGT TTTGTGAAAG TGCTCACCGT CCCCGGCAAA
GACCGCATTC TGGGTGTGAC CATCGTTGGT GAGCACGCCG GGGATTTGCT GGCCGAATTC
GTGCTGGCCA CGAAGCATGG TTTGGGTTTG AACAAGATTC TGGGCACCAT TCACACCTAC
CCGACGCTGG CAGAGGCAAA TAAGTACGTT GCCGGTGAAT GGAAGCGTGC GCACGCGCCT
CAAAAAGTGC TGGCCCTGTT GGCACGCTTT CATGCCTGGA AGCGAGGCTA A
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| Protein sequence | MKKLLILSAA ALLVFGFFAL DLNRYLTLDG MKASLGQFES QRAASPVVVG LVFFSVYVVV
TAMSLPGAAI LTLAAGALFG LSMGTLIVSF ASSIGATLAF LASRYVLRDA IQRRFGDRLK
VINEGMAKDG ALYLFTLRLV PLFPFFLVNL LMGLTPVRTL SYYWVSQVGM LAGTLVYVNA
GTQLAQINSL VGIVSPGLLL SFALLGVFPM LAKMFMRLLQ GRRVYAKWQR PKKFDRNLVV
IGGGAAGLVT SYIAAAVKAK VTLVEAHRMG GDCLNYGCVP SKALIKSARI ANQMRHAESY
GLSAAEPQFS FRKVMARVHE VIRTVEPHDS VARYTELGVE VLEGYARIVD PWTVEIKLNN
GGMQRLTTRS IVIAAGASPF VPPLPGLADV GYVTSDTLWD EFAKLDAAPK RLVVLGGGPI
GCELAQSFAR LGSKVTQIEM APRIMIREDL EVSDLARDSL RRDGIDVLTG HKALRCEREG
TRKFIVAEHQ GKEIRIEFDA LLCAVGRVAR LQGYGLEELG IPTQRTVAVN DYLETLYPNI
YAAGDVAGPY QFTHTAGHMA WYAAVNALFG DFKRFKVDYS VVPWATFIQP EVARVGLNEQ
DAKEKGIAHE VTKYGLDDLD RAIADGTAYG FVKVLTVPGK DRILGVTIVG EHAGDLLAEF
VLATKHGLGL NKILGTIHTY PTLAEANKYV AGEWKRAHAP QKVLALLARF HAWKRG
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