| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1617 |
|---|
| Symbol | |
|---|
| ID | 3960481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1749518 |
|---|
| End bp | 1750372 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637916441 |
|---|
| Product | phosphonate ABC transporter permease |
|---|
| Protein accession | YP_522879 |
|---|
| Protein GI | 89900408 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.36633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACG CTTCGCCCAC TCCGGCCTTG ATGCCAAACC GCCCCGCCTT GCGTGACCCG
GCTTGGGCCG CGCGCGTCTT CTGGGCGCTG GCTGGTTTGG CCTTGCTCTG GCCAGCTGTG
GTGCTGACCG AATTCAAGCC CTGGGTGCTG CTGGAGCCGG GCGCCTTGAA GCCAGCGCTG
AATTTTGTCG GCGCTTTCTT CCCGCCGCGC ACCGACGCCG AGTTTTTGGG GCTGCTGGCG
CGTGAAACCT GGCGCACCGT GGCCATGGCC ACAGCGGGCC TGACGCTGGC GCTGCTGCTG
GCGATCCCTT TGTCGCTGCT GTCGGTGCGG GTGCTGTCGC TATCAAGCCT GACCGGTCGC
ATGGCGATGG TACCCAGCGT GCTGCGCCAA GGGGTGCGCT GGCTGCTGCT GGTGCTGCGC
AGCGTGCCCG AGTTGGTGTG GGCGCTGGTG TTTGTGCGGG TGGTCGGCCT GGGGCCCACC
TCGGGCGTGC TGGCCATTGC GCTCACCTAC AGCGGCATGC TGGGCAAGGT GTACGCCGAT
ATCATGGAGA GCGGCGACGC CCACGCCACC ACTAATCTGA TGCGCAATGG TTCGGGTCGG
CTGCAAGCCT TCTTCTATGG CCTGCTGCCG CAAAACGCGG GTGAGCTGAC CAGCTACACC
GTGTACCGGT GGGAGTGCGC CATACGCTCC AGCGCGGTGT TGGGTTTTGT CGGGGCCGGT
GGGTTGGGGC AGCTCATGGA CTCCTCCATG AAGATGTTCA ACGGGTCTGA AGTGGCCAGC
ATTTTGCTGA TTTTCATGGC GTTGGTGTGG CTGGCAGACC GCATGAGTGC GATGCTGCGC
AAGGGTTTGG CATGA
|
|---|
| Protein sequence | MPNASPTPAL MPNRPALRDP AWAARVFWAL AGLALLWPAV VLTEFKPWVL LEPGALKPAL
NFVGAFFPPR TDAEFLGLLA RETWRTVAMA TAGLTLALLL AIPLSLLSVR VLSLSSLTGR
MAMVPSVLRQ GVRWLLLVLR SVPELVWALV FVRVVGLGPT SGVLAIALTY SGMLGKVYAD
IMESGDAHAT TNLMRNGSGR LQAFFYGLLP QNAGELTSYT VYRWECAIRS SAVLGFVGAG
GLGQLMDSSM KMFNGSEVAS ILLIFMALVW LADRMSAMLR KGLA
|
|---|
| |