| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1487 |
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| Symbol | |
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| ID | 3960928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1600244 |
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| End bp | 1601548 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916306 |
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| Product | putative transporter signal peptide protein |
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| Protein accession | YP_522751 |
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| Protein GI | 89900280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.269633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAT ATTCCCGTAA GGCCCTGAAA TTGCTGGCGC TGGCCTTATG CGTGCCAACC
CTGACGTTCG CGCAAGCGAC CCAAACGCCC ACATCGGCGC CGATCAAGAT CGCCATGATT
GAGGGCTTGA GTGGCCCGTT TGCCAACACG GGCGAGGCGG TGTTTCGCAA CCTGATCTGG
GCGGTGGAGC GCGTCAATGC GCGTGGCGGC GTCAAGATTG CCGCCTCCGG CGAGCTCGCT
GGGGGCGGCC GACCTCTGGC GTTGGAGCGC TACGACAGCA AGGGTCAGAA CGAGGAAGCG
CTGACGGCCC TCAAGTCCGC CATCGACGAT GGCGCGCAAT TCATCATGCA GGGCAACTCA
TCTGCCACGG CGGCGGCGCT GATTGACGCC ATCAACAAGC ACAACGAACG AGAGCCTGGC
AAACGTGTTC TGTTCCTGAA CTACTCGGCC GTCGATCCCA TCCTGACCAA CGAAAAATGC
AGTTTTTGGC ACTTTCGTTT TGATGCCCAT GCCGACATGC GCATCACCGC GCTGATGGAA
GTGCTAAAAG AAGACAAAGC CCTCAAGAGT GTTTACATCA TTGGCCAGGA CTACAGCTTT
GGCCATGCCG TGGCACGCGA GGCGAAACGC CAGCTTGCGG CCTCGCGCCC GGATGTGCAG
GTGGTGGGCG ACGAGCTGCA CCCGGTCGGA CGTGTCAAGG ACTTTTTGCC GTATGCCGCC
AAAATCAAGG CCAGTGGCGC GCAGGCAGTC ATTACCGGCA ACTGGGGCAA CGACCTGACG
CTGCTGGTGA AAGCGGCGAA AGAAGTCGGC TTTGAAGGCA AGTTCTACAC CTTCTACGGC
AACGCGCTGG GTGCGCCAGC GGCCATCGGC GACGCGGGCA TCGGTAAAGT GGTGGCGGTG
GCCGACTGGC TGCCCAACGT CCAGACGGCG CAAAGCGAAG CCTTCTACCA GTCGTTTCGC
CAGCGTTTTC CCAATCCGGC TGACGACTAC GTTCACATGC GCATGCAACT GATGGTGGAA
TCACTGGCGC AGGCAATTGA AAAAGCAAAT ACTACGAATT CGATAGCTGT TGCCAGACAG
CTGGAGAGGG CTAGAGTTGT TTTTGGCTCA CAAAGCGGGG CGATGCGGGC GGCTGACCAC
CAGTTTCAGC AGCCGCTGGT GGTGGGCGTG ATGGATAAGC AAGGCGCGCC CGGCGTGAAG
TTTGATGTGG AGGGCTCGGG CTACGGTTTT CGAGTTATCA AAACCATTGC TGCCAAGCGG
GCCGAGTTGC CCACCACCTG CAAAATGCAA AGGCCTGTGG AATAA
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| Protein sequence | MFVYSRKALK LLALALCVPT LTFAQATQTP TSAPIKIAMI EGLSGPFANT GEAVFRNLIW
AVERVNARGG VKIAASGELA GGGRPLALER YDSKGQNEEA LTALKSAIDD GAQFIMQGNS
SATAAALIDA INKHNEREPG KRVLFLNYSA VDPILTNEKC SFWHFRFDAH ADMRITALME
VLKEDKALKS VYIIGQDYSF GHAVAREAKR QLAASRPDVQ VVGDELHPVG RVKDFLPYAA
KIKASGAQAV ITGNWGNDLT LLVKAAKEVG FEGKFYTFYG NALGAPAAIG DAGIGKVVAV
ADWLPNVQTA QSEAFYQSFR QRFPNPADDY VHMRMQLMVE SLAQAIEKAN TTNSIAVARQ
LERARVVFGS QSGAMRAADH QFQQPLVVGV MDKQGAPGVK FDVEGSGYGF RVIKTIAAKR
AELPTTCKMQ RPVE
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