Gene Rfer_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1444 
Symbol 
ID3963141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1556546 
End bp1557523 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID637916261 
ProductAlpha/beta hydrolase fold-3 
Protein accessionYP_522708 
Protein GI89900237 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.290312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCT GGCTGGACAT GATGGCCGCG CGACAACCGT TACGGCGCGT CGCGCTGGAC 
GTAGGCATGC ATGCGGCTGC CGGTATGGTC GACTTTCTGC CGCAGATGAA AGAGCGCCTG
GCCACCTGTA CGCTGATTGA GGACGTTGAA TATGCCCGCC ATGGCGACGT CACTCTGCGG
CTGGATATCC TGCAGCCGCA AGGGCTTGGC CCGCATCCGG TGTTGATTTA TTTGCACGGC
GGCGCATTTG CCATCGGCTC CAAGCGAACC CATCGAGCAC TCGCCGCTGC CTATGCTTCG
CGGGGCTATC TGGTGTGCAA TATCGACTAT CGGCTGGCGC CGCAATTTCC GTTTCCTGCC
GCGCTTGAAG ATGCCTGCGC CGCCTGGCTG TGGGTGGCAG ACCATGTCGG GAACTATGGT
GGCGATAGGC AGGAGATGGG GCTGGCCGGT GAGTCGGCCG GTGCCAATCT GGCCCTTGCC
ATCACGCTGG CATGCTGTAC CCGTCGACCG GAGCCATTTG CCGCACCGTT ATTTGAACGC
GGCCTGCGCC CGGTCGTGAC GCTGCTGTAC TACGGCTTTT TGCAAGCCAG CATGCCGCAG
CGCTACCGTC GTTCGGGGGT GTCGGTATTC GCAGCCAGTA TCGCGACAGA CGCGGCGCGT
TCTTACCTGG GTAAATCCGC CAACCATCCC GCTGCGGAAC ACGCCCTGGC TGACCCGTTG
TGTGTGATCG AAGCGATGGC GGTGGCACCC ACTCTGCCGT CTGTTTTTAT AGCCGCGGGC
CTGGATGACC CGGTTGCGGC CGACTCCCAA CGCCTTGAAC AGGCGCTGCA GCGGCTGCAG
TTAGCCCACA GTGCGCACTA TTACCCTGGC GAAACTCACG GTTTTCATGT GATGTTCTGG
CGGGAGCAGG CCGTTCGATG CTGGCGCGAC AGTTTTGAGT TCCTGCGGCG CTATCTGCCC
ATCCCGGTCG TTGTCTAG
 
Protein sequence
MLRWLDMMAA RQPLRRVALD VGMHAAAGMV DFLPQMKERL ATCTLIEDVE YARHGDVTLR 
LDILQPQGLG PHPVLIYLHG GAFAIGSKRT HRALAAAYAS RGYLVCNIDY RLAPQFPFPA
ALEDACAAWL WVADHVGNYG GDRQEMGLAG ESAGANLALA ITLACCTRRP EPFAAPLFER
GLRPVVTLLY YGFLQASMPQ RYRRSGVSVF AASIATDAAR SYLGKSANHP AAEHALADPL
CVIEAMAVAP TLPSVFIAAG LDDPVAADSQ RLEQALQRLQ LAHSAHYYPG ETHGFHVMFW
REQAVRCWRD SFEFLRRYLP IPVVV