| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1424 |
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| Symbol | |
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| ID | 3963198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1531664 |
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| End bp | 1533979 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916241 |
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| Product | malic enzyme |
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| Protein accession | YP_522688 |
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| Protein GI | 89900217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAG AACTTTCCCC CGCCGAATAT GCCCTGCGTG AAGCAGCCCG CGACTACCAT
CGCAACCCCA CGCGCGGGAA GATCTCGGTC ACCCCGACCA AGCCGCTGTC GAACCAACGC
GATTTGTCGT TGGCTTATTC ACCCGGCGTG GCCTACCCGT GTCTGGACAT TGAGGCCGAC
CCTTCGCTGG TGACTGAATA CACTTCGCGC GGCAATTTGG TCGGTGTCAT CACCAACGGC
ACAGCGGTAT TGGGCCTGGG CGATATCGGA CCGCTGGCTT CCAAGCCGGT GATGGAGGGC
AAGGGCTGTC TGTTCAAGAA ATTTGCCGGC ATTGATGTTT TTGACATTGA ACTGGCCGAG
CGCGACCCCG ACAAATTGAT TGAGATCATT GCGGCGATGG AGCCCACCCT GGGCGGCATC
AACCTGGAGG ATATCAAGGC GCCCGAATGC TTCTACATTG AAAAGAAATT GCGCGAGCGC
ATGAACATAC CGCTGTTTCA TGACGACCAG CACGGCACGG CCATCATCTC CAGCGCGGCC
TTGCTTAACG GACTGGAACT GGTTGGAAAA CGCATTGAGG AAGTCAAAAT TGCAGTCTCG
GGTGCTGGCG CCGCCGCGTT GGCCTGCCTG GGTGTGATGG TGGGTCTGGG GGTGCGGCGC
GAAAACGTTT TTGTGTGTGA CTCCAAAGGC GTGATCTATG AAGGCCGCCC CGGTGGTTTC
GATGAATCCA AGACCCCTTT TGCACAGAAA ACCGAATTGC GCACGCTGGC CGATGTTGTC
AATGGGGCCG ATGTCTTCCT TGGCTGCTCA GCCGCCGGTG TGCTGACGCA GGACATGGTC
AAAACCATGG CCCGCAGCCC GATCATTTTG GCGCTGGCCA ACCCGGAACC CGAGATTCGC
CCTGAATTGG CCAAAGCAGT GCGCCCCGAT TGCATCATCG CCACCGGCCG CTCGGATTAC
CCGAACCAGG TCAACAACGT CCTGTGTTTT CCCTACATTT TCAGAGGCGC GCTGGACTGC
GGCGCCACCA AGATCACCGA GGCCATGAAA CTGGCCTGCG TGCGCCAGAT TGCCGACTTG
GCCAAGGCCG ACATCAGCGA GGAAGTGGCC AATGCCTATG CTGGCAAGGA GCTGGTGTTT
GGCTCCGAAT ACCTGATTCC AACTCCCTTT GACTCGCGCC TGATCCTGCG CATTGCGCCC
GCCGTGGCCA AAGCCGCCGA AGAGTCCGGT GTGGCCGCCC GCCCCATCAA GGACATGGAC
GCCTACCGTC AGCAGTTGTC ACGTTTTGTT TACCAGACCG GCATGATCAT GCGCCCGGTA
TTCACCGCCG CCAAAGCCGT GCCCCTTGAA GCCAAACGGG TGGCCTACGC CGAAGGCGAA
GACGAGCGGG TGCTGCGCGC CGTGCAGGTG GTGGTGGACG AAGGGCTGGC CCGGCCGATC
CTGATTGGGC GGCCGGCCGT CATTGAGGCG CGCTTGCTCA AAGCCGGCCT GCGCCTGCGT
CTGGGCACCG ATTTGGAGTG CGTCAACCCC GAAGACGACC CGCGCTTTCG CCAATACTGG
GAAACCTACC ACCGCCTGAT GGGCCGCCGT GGTGTCTCCA TCGAAGCCGC CAAGGCCGCC
GTGCGCCGCT CAAGTACCAC CATTGCCGCC TTGATGCTCA AACTCGGCGA TGCCGATGCC
ATGTTGTGTG GACTGCTGGG TCGTTTTGAC GTGCATCTGG AGCATGTCCG TGATGTGATC
GGGGTTAAAG AGGGTGCTTG CGGATTTGCA ACCTTGAACG CCTTGATGCT GGAGAAGCGC
ACGCTGTTTA TCGCAGACGC TTTCGTCAAT GAAGACCCGG ACGCCGAGCA ACTGGCCAGC
ATCGCCGTGA TGGCGGCCGA TGAAGTCCGT CGTTTTGGTT TGCCGCCCAA GGTTGCCTTT
CTGTCGCACT CGATGTACGG CTCCTCCAAC CGCAAATCGG CCGTCAAAAT GCGTCTGGCC
CATGAGCTGT TCTGCAAAAT GGCGCCCGAT GTGGAGTCCG ACGGCGAACT GCATGGCGAT
GCCGCGCTGT CAGAGGACAT GCGCAACGCC GCCCTGATGG ACAGCAAGTT CCATGGCGAG
GCCAATGTGT TGATCTGCCC CAACCTGGAC GCCGCCAACA TCTTGTTCAA TGTGCTTAAA
GTCACGGGCG GAAACGGCGT CACCGTCGGC CCCATCTTGC TGGGTGCAGC CGCCTCGGCC
CATGTGCTCA CGCCATCTTC GACGGTACGG CGCGTGGTCA ACATGACGGC CCTGGCCGTG
GCCAATGCGG ATCATGGCAA GGGCCTATCT CGGTAA
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| Protein sequence | MTKELSPAEY ALREAARDYH RNPTRGKISV TPTKPLSNQR DLSLAYSPGV AYPCLDIEAD
PSLVTEYTSR GNLVGVITNG TAVLGLGDIG PLASKPVMEG KGCLFKKFAG IDVFDIELAE
RDPDKLIEII AAMEPTLGGI NLEDIKAPEC FYIEKKLRER MNIPLFHDDQ HGTAIISSAA
LLNGLELVGK RIEEVKIAVS GAGAAALACL GVMVGLGVRR ENVFVCDSKG VIYEGRPGGF
DESKTPFAQK TELRTLADVV NGADVFLGCS AAGVLTQDMV KTMARSPIIL ALANPEPEIR
PELAKAVRPD CIIATGRSDY PNQVNNVLCF PYIFRGALDC GATKITEAMK LACVRQIADL
AKADISEEVA NAYAGKELVF GSEYLIPTPF DSRLILRIAP AVAKAAEESG VAARPIKDMD
AYRQQLSRFV YQTGMIMRPV FTAAKAVPLE AKRVAYAEGE DERVLRAVQV VVDEGLARPI
LIGRPAVIEA RLLKAGLRLR LGTDLECVNP EDDPRFRQYW ETYHRLMGRR GVSIEAAKAA
VRRSSTTIAA LMLKLGDADA MLCGLLGRFD VHLEHVRDVI GVKEGACGFA TLNALMLEKR
TLFIADAFVN EDPDAEQLAS IAVMAADEVR RFGLPPKVAF LSHSMYGSSN RKSAVKMRLA
HELFCKMAPD VESDGELHGD AALSEDMRNA ALMDSKFHGE ANVLICPNLD AANILFNVLK
VTGGNGVTVG PILLGAAASA HVLTPSSTVR RVVNMTALAV ANADHGKGLS R
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