| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1413 |
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| Symbol | |
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| ID | 3963186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1521515 |
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| End bp | 1523386 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916229 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_522677 |
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| Protein GI | 89900206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.15568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG CTATTCAAGC GACGGGCGAT ATTTCGCTTG TCGAAAACTT TTCCAATGAC
ACTGTCGAAG TGACGCAAAA CCCTGCGCAA GTCGCAGCAG TGATTCAAAT TGCCCAGGTG
CCTGCCGCCG TTGAGGCCAT TGCCGAGGTT CCCAATGGCT TTGTCACTCT GGGCCTGGCC
CCCGAGTTGA TTCAAGCCGT GAAAGACCTG GGTTTCACCC AGCCCACCAC GGTGCAGCTC
AAGACCATTC CCCTGGCCAT GCAAGGCCAC AGTGCAAGTG ATGACGCCGC ACGCTTTATT
GACCTGATGG TGTCGAGCCA GACCGGTAGT GGCAAGACCG CTGCTTTCCT GTTGCCCGTG
TTGCACACCC TGCTGACACA AATGGCGCAA GCCGAGGCGA AAGAACGCAG CGATTTCGAG
CGCGCCGTGG CCGATGCTGC GGCCAAAGGT GAGGCGCCCC CTAAGCGCGC CAAGCGCAAA
GACCCGACCA ACCCGCGCCA TTTCGCACCT GCTGCGCCCG GCGCCTTGAT CGTTTGCCCG
ACGCGGGAAC TGGCCCAGCA AGTGGCCCAT GACGCCATTG ATCTGGTACA GCATTGCCGC
GGTCTGCGCG TTGCCAACAT TGTGGGTGGC ATGCCTTACC AGCTGCAAAT TGCGAAGCTG
CAAAATGCCA ACCTCGTGGT GGCCACACCG GGGCGTTTGC TGGATCTGCA GCGCTCGATG
CAAATCAAGC TCGATCAGGT GCAGTTCCTG GTGGTTGACG AAGCCGACCG CATGCTGGAC
CTGGGTTTCT CCGATGACCT GGCGGAAATC AACCAGTTGA CCATTGAGCG CAAGCAAACC
ATGATGTTCA GTGCCACGTT TGCACCGCGC ATCCAGCAAC TGGCCTCACG TGTCATGCGC
GAACCCCAGC GTTTGCAGAT CGATTCGCCG CAAGAAAAAC ACGCCAACAT CAGCCAAAAG
CTGTTCTGGG CTGACAACGC CCAGCACAAG CGCAAATTGC TGGATCACTG GTTGCGCGAC
ACCACCATCA ATCAGGCGCT GGTATTTGCC AGCACCCAGA TCGAGTGTGA CGGCCTGGCC
AACGACCTGC AGCAAGAAGG CTTCTCCGCC GTTGCCTTGC ATGGTGCTTT GAGCCAGGGC
CTGCGCAACC GACGCTTGAT GGCGCTGCGC CAAGGTCAGG TGCAGATTCT GGTCGCAACC
GATGTGGCTG CGCGCGGCAT CGACGTGCCC ACAGTCACGC ACGTGTTCAA CTTTGGTTTG
CCGATGAAGG CAGAAGATTA CACGCACCGT ATTGGACGCA CCGGGCGTGC CGGGCGCGAC
GGTATTGCCG TGACCTTTGC CGAGTTCCGC GATCGTCGCA AGATCATGGA CATTGAGCAC
TACACCCACC AGCAGCTCAA GGGCGAAACC ATTCCCGGCA TGGAGCCGCA ACAGCGCTTC
CCTGATTCGC GTCCCACTTC CAATTTTGGT GGCCGTGAAA GCCGTGGCGG TGGCGGTGAC
TACCATTCGC GTGAGCGTGG TTTTGGTGGC GGTGGCCGTC CTGGCGGTTT CGGCGCCAAT
CGTGGTGGCT TTGCGGACAG AAACGCGGGC GCGCCCCGTG ATTCAGGCAA CAACGGTTAC
CAAAATGCCA GCAACAACGG CTTCGGTCAA CGCGATGCGC GCAGTGGTGG TGCACCCGAA
GGCTTCAACT ACGAACGCAA AGGCGGTTTT AATGATCGTT TTGCCGGCGC CCGCAACGAC
GGTGCAGCAC CGCGCGGCGA CTTTGGCGCC CGCAAGCCTG CGTTTGGCAA GCCGATGGGT
GCGAAGCCCG GTAATGGCGG CAAGGTGTTT GTGCCGCGCG ACGCCAAGAA GCGCCCTGCG
CGTAGCGCTT GA
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| Protein sequence | MTDAIQATGD ISLVENFSND TVEVTQNPAQ VAAVIQIAQV PAAVEAIAEV PNGFVTLGLA
PELIQAVKDL GFTQPTTVQL KTIPLAMQGH SASDDAARFI DLMVSSQTGS GKTAAFLLPV
LHTLLTQMAQ AEAKERSDFE RAVADAAAKG EAPPKRAKRK DPTNPRHFAP AAPGALIVCP
TRELAQQVAH DAIDLVQHCR GLRVANIVGG MPYQLQIAKL QNANLVVATP GRLLDLQRSM
QIKLDQVQFL VVDEADRMLD LGFSDDLAEI NQLTIERKQT MMFSATFAPR IQQLASRVMR
EPQRLQIDSP QEKHANISQK LFWADNAQHK RKLLDHWLRD TTINQALVFA STQIECDGLA
NDLQQEGFSA VALHGALSQG LRNRRLMALR QGQVQILVAT DVAARGIDVP TVTHVFNFGL
PMKAEDYTHR IGRTGRAGRD GIAVTFAEFR DRRKIMDIEH YTHQQLKGET IPGMEPQQRF
PDSRPTSNFG GRESRGGGGD YHSRERGFGG GGRPGGFGAN RGGFADRNAG APRDSGNNGY
QNASNNGFGQ RDARSGGAPE GFNYERKGGF NDRFAGARND GAAPRGDFGA RKPAFGKPMG
AKPGNGGKVF VPRDAKKRPA RSA
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