Gene Rfer_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1293 
Symbol 
ID3962166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1387798 
End bp1388352 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID637916108 
Producthypothetical protein 
Protein accessionYP_522558 
Protein GI89900087 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC AGTCCCCTTT TTCATGGCTG GAGGGTCTCC TCCAAAATCT TCCACCCCTG 
CCCAATTTGC AGCCGCCGGA ATGGGCGGTT GATGAGGCGC AGCGTCGCAT CGTCTTGCTG
CTCAATCACA TTCTGATGCA GGAAGTTGAG GCGACCAGCC GCCTGGCCAG GCAAAAAGGG
CGTGTCGTCC TGATGCAGTG GCGCTCATTT TCTGTCAGGT TGGTTGCTAC GCCGGCGGGT
TTGCTGGATC GGGCCACGGC GCAAGACAAG CCCGACCTGG TGTTGGCGGT TTCTGAAGAG
TCGCCGTTGA CACTCGCTCA AAACGTGCTG CGAGGCGACA AACCGGCGGT GCGTATTGAG
GGCGATGTGC AACTTGCCGC CGATGTGAAT TGGCTGGTCG ACCATGTGCG CTGGGACATT
GAAGAAGATC TGGCGCGTGT GATCGGCGAC GCGCCCGCGC ATACCTTGAG TCAAGCTGCC
CGCAACATGG CGGCCGCCCT GCGTCAGTTT CTGGGCAATG CCGCGGCGGC CGACTCGACC
AAGGCGCCCA CATGA
 
Protein sequence
MATQSPFSWL EGLLQNLPPL PNLQPPEWAV DEAQRRIVLL LNHILMQEVE ATSRLARQKG 
RVVLMQWRSF SVRLVATPAG LLDRATAQDK PDLVLAVSEE SPLTLAQNVL RGDKPAVRIE
GDVQLAADVN WLVDHVRWDI EEDLARVIGD APAHTLSQAA RNMAAALRQF LGNAAAADST
KAPT