Gene Rfer_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1289 
Symbol 
ID3962162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1385080 
End bp1385523 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID637916104 
Producthistidine triad (HIT) protein 
Protein accessionYP_522554 
Protein GI89900083 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACT CAACTTGTCC CCTGTGCGCC GCCACGGGTG GTGCACTGGT GTTTCAGGGC 
GAAAAATTCC GGGTCATCCG GGCGATGGAG GCCGGTTTCC CGGCCTTTTA CCGGGTCGTC 
TGGACGGCGC ATGTGGCCGA GTTTTCGGAC CTTGACCCGA GCGATCGCGC CTTGTGCATG 
GCGGCTGTGT GTGCCGTAGA GCAGGCCTTG CGGGAGCATC TGCAGCCGAC CAAGATCAAC 
CTGGCGGCCC TGGGCAATGT GGTGGCGCAC CTGCACTGGC ATGTGATTGC CCGCTTTGAC 
TGGGACAGTC ATTTTCCGGC GCCGGTGTGG AGCGCCCCTC AGCGCCCGGT TGATTTGGCG 
GCTGTGGCGG CCCTTGCGGC CCGCCTGGAA GACGTGGATG GCACTATTGA ACGGGCACTG 
TCCGAGATGC GCGCCGCTTG GTGA
 
Protein sequence
MSDSTCPLCA ATGGALVFQG EKFRVIRAME AGFPAFYRVV WTAHVAEFSD LDPSDRALCM 
AAVCAVEQAL REHLQPTKIN LAALGNVVAH LHWHVIARFD WDSHFPAPVW SAPQRPVDLA 
AVAALAARLE DVDGTIERAL SEMRAAW