| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1260 |
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| Symbol | |
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| ID | 3962037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1354551 |
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| End bp | 1355699 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916074 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_522525 |
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| Protein GI | 89900054 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.903848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATT TTGTGCTTGT TACAGGTGGC GCTGGGTTTA TTGGTCAATG CGTTTCTCGT
AAGCTACTAG GTCAAGGCTC AAAAGTGCGT ATTCTCGATA ACTTCAGTCC ACAGATACAC
TCCACGGAAG TTCTGCCAGT TGATCTGGCA GGACATGTAG AGGTAATCAA AGCAGACGTG
CGTGATCGAG ATGCGCTCAG GCGCGCATTG CCGGGTGTAG ACACTGTCGT GCATCTCGCG
GCAGAAACGG GTACGGGTCA ATCGATGTAT GAGATAGAGC GCTATTTCAG CGTCAACGCG
CAGGGCACTG CCACTTTGCT GGATTTGCTG CAGAACGATG ATTGCGGCAA GTCGCTTCGC
TCTATTGTGG TGGCGTCGAG TCGCGCGGTC TATGGCGAGG GCGCTTGCCA GTGCGCGGCC
CACGGCATGG TGTTCCCGGA GCAACGTACC CGCGAGCGCA TGTCTGGCGG CGCGTTCGAG
CCAGTGTGCC CCGTCTGCGG GTCGCCTGTA AGGCTATCGC CCACGCCAGA GTCAGCGCCC
TTTATGCCCA TGTCAATGTA TGGGTTGACC AAGCAGGTGC AAGAGCAGGC CGTCTTGTTG
TTTGCGCGCA CGCGTGGCAT CAATGGATTT GGTCTGCGCT ATCAAAATGT GTATGGACCC
GGTCAGTCGC TAAAGAACCC GTACACGGGA ATTTTGGCGG TGTTTTCAAA TTTGGCGCGT
CAAAACCAGG GGATCGAGAT TTACGAGGAT GGGCTCGAAT CAAGAGACTT TGTGTATATA
GATGACGTGG TTGAGGCCAC GATCCGCAGT ATCAACTACT CGGATCAGTT TGTCGGGGCT
TTGAACGTGG GGTCAGGTCA GGCCACCAGT GTGATGACTG TTGCGCAAGA AATCAAAGCT
TACTTTGACA GTAGCAGCAC CATCAAGGTC ACTGGGGCGT TCCGCATGGG TGATATTCGT
CACAACATTG CCGATGTGTC GAAACTTGAG CAAGTGTTGG GCTTTGTGCC TGGCGTGCCG
TTCAAACAAG GTTTGGCTAA CTTTTTGGGC TGGGCCGCCG AGCAAGCGCC GGAGGATAAG
GCGGCCTATC TGCGCTCGGT CAGCGAGCTG ACGGCGCGCG GGCTGATGGG TAAGACAACG
GCGCAATGA
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| Protein sequence | MSNFVLVTGG AGFIGQCVSR KLLGQGSKVR ILDNFSPQIH STEVLPVDLA GHVEVIKADV
RDRDALRRAL PGVDTVVHLA AETGTGQSMY EIERYFSVNA QGTATLLDLL QNDDCGKSLR
SIVVASSRAV YGEGACQCAA HGMVFPEQRT RERMSGGAFE PVCPVCGSPV RLSPTPESAP
FMPMSMYGLT KQVQEQAVLL FARTRGINGF GLRYQNVYGP GQSLKNPYTG ILAVFSNLAR
QNQGIEIYED GLESRDFVYI DDVVEATIRS INYSDQFVGA LNVGSGQATS VMTVAQEIKA
YFDSSSTIKV TGAFRMGDIR HNIADVSKLE QVLGFVPGVP FKQGLANFLG WAAEQAPEDK
AAYLRSVSEL TARGLMGKTT AQ
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