| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1258 |
|---|
| Symbol | |
|---|
| ID | 3962035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1352760 |
|---|
| End bp | 1353263 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637916072 |
|---|
| Product | transferase hexapeptide protein |
|---|
| Protein accession | YP_522523 |
|---|
| Protein GI | 89900052 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.137738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTTTC CAGTCCACGT TCGCGGAAGA TCGTCGATGG AGCTGGGCAA TGGCCTTGCG
ACGGGGGTGA ACGTGCGGTT AGATGCAACT GCAATCCGTG ACAGCCCATC CGTTTTACGT
ATCGGTCGCC ACGTTCAGAT TAGTGAATCA GTTCATATTG GTGCGATTGA AAAGGTGGTG
ATCGGCGATC ACACACTCAT CGCCAGCCGT GTCTTTATCA GTGACCATAA CTGCGGCAAC
TATCAAATTC CAGATGCTGC GTCCTCGCTG GATATTCCGC CTGCAGAGCG GCCGCTTTCA
TCAATGCCTG TGCGTATTGG CTGCAAAGTC TGGTTAGGTG AACAAGTCTG TATCCTGCCT
GGTGTGACTA TCGGAGATGG TGCCCTCGTT GGTGCCAATT CAGTAATTGC TCATGACATA
GCGTCGAATT CAATCGCTGC TGGCAATCCA GCAAGCGTGA TACGTGTGTT CGACGCGTCA
ACCCAAACTT GGAAAGGAAT ATAG
|
|---|
| Protein sequence | MRFPVHVRGR SSMELGNGLA TGVNVRLDAT AIRDSPSVLR IGRHVQISES VHIGAIEKVV
IGDHTLIASR VFISDHNCGN YQIPDAASSL DIPPAERPLS SMPVRIGCKV WLGEQVCILP
GVTIGDGALV GANSVIAHDI ASNSIAAGNP ASVIRVFDAS TQTWKGI
|
|---|
| |