Gene Rfer_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1245 
Symbol 
ID3962022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1340257 
End bp1340859 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content50% 
IMG OID637916059 
Productsugar isomerase (SIS) 
Protein accessionYP_522510 
Protein GI89900039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.279985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA TCGACAAATT TTTTACCCGC GACGCATCTA CATTTGCAGG TGCCTATCTC 
AAGTACCTGT CTTCTGTGCT CGGTGCGATA GATGTCAAAG AAATTGAACA ATTTATTCAA 
ACGCTGCTAG ACGCTCGCGA GCGCGGTGCA ACTATATTTT TTATCGGCAA TGGGGGCAGT 
GCAGCCACAG CCAGTCATTT TGCGAACGAC TTGGGTATTG GCACCAATTG CTACGACAAA 
CCGTTTCGCG TCATAAGCCT GACTGACAAC CAGGCCATCA TCACGGCCAT TGGAAACGAT 
TTTGGCTACC TGGATATTTT TAGCCGGCAA CTGCAAGTGC TGGGCAAACC TGGCGACGTG 
CTGGTGGCCA TCTCTGCGTC TGGCAACTCG CCCAATTTAT TGCGCGCATT TGACTATGCC 
AGAACGGCAG ACATCAAAAC AGTAGCCATT ACGGCCTTTG ACGGCGGGAA AATGAAAACT 
GTGGCAGACG AAGGCATCCA CGTACCCACA GCCCCCAAAG AATATGGCCC TGCTGAAGAT 
GCACACATGG TGCTGGACCA CCTTGTGGGA GCTTACCTGA TGCGTGTGGT CAAGTTGGCT 
TAA
 
Protein sequence
MNNIDKFFTR DASTFAGAYL KYLSSVLGAI DVKEIEQFIQ TLLDARERGA TIFFIGNGGS 
AATASHFAND LGIGTNCYDK PFRVISLTDN QAIITAIGND FGYLDIFSRQ LQVLGKPGDV 
LVAISASGNS PNLLRAFDYA RTADIKTVAI TAFDGGKMKT VADEGIHVPT APKEYGPAED 
AHMVLDHLVG AYLMRVVKLA