| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1232 |
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| Symbol | |
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| ID | 3961222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1327780 |
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| End bp | 1328829 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916046 |
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| Product | ribonuclease Z |
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| Protein accession | YP_522497 |
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| Protein GI | 89900026 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.407622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGACG CCGTCACCGG CCAACCCCAG CTTGCCGCCA TGCGCCCGAT TTTCAGACCC
GCACTCGTGA ACGATCCGTT CGGCGACCCT GGCCTGTACG TTGATTTCAA GTTCGAGAAG
CGGGCTTTGT TGTTCGATCT GGGGGATCTC ACGGCGCTGC CACCGAAAAA GCTGCTGCGC
GTTTCAGATG TCTTCGTCTC GCACACCCAC ATGGACCACT TTTTCGGTTT CGACCGGCTG
CTTCGCCTCT GCCTCGGCCG CAACACAAGC TTGCGCCTGT ATGGCCCACC GGGTTTTGCG
GCCCAAGTCG AACACAAGCT CGCCGGCTAC ACCTGGAACC TGGTCGAGAA CTATCCCGGC
GACTTTTTTA TGGACGCCTG GGAGCTTGAT GCCAACTGGC AGGCCCGCGG CACCCGCCTG
CGCTGCCGCA ATCGGTTTCG CGCCGAGCCG CTGGCGGCGC GGCATTTGCC GGGCGGCGTG
CTGCTCGACG AGCTGGCGTT TCGCGTGCGC GCGGCGTTTC TCGACCACGG TACCGCCTGC
CTTGGCTTCG CGGTCGAGGA AAAGATCCAC GTCAACGTGT GGAGGAACCG GCTGGCCGAA
CTCGGGTTGG CGGTCGGGCC GTGGCTGAAG GAACTCAAGG ATGCCGTGCT GCGCAACGCA
CCTGACGCGA CAACGGTGCG CGCCTGCTGG CGCGACGGCA GCGGCGAGCA TGAACGTGTT
TTATCCCTTG GTTTGCTCAA GGCCGCGGTC TTGCGGCAGG TCGAGGGCGA GAAGATCTGC
TATGTGACCG ACGTCGCCTT TCACCCGGAC AACGTCCAAC GCATCACGGC ACTGGCGGCC
AACGCGGCGC AGTTATTCAT CGAATGCGTA TTTCTCGACC AGGATGCCGA CCATGCGGCC
CGAAAACATC ATCTCACCGC GCGCCAGGCG GGCAGCATCG CGCGTGCGGC CGGCGCCAAA
CTGGTCATTC CGTTTCATTT TTCGCCACGC TACGCCGACC GCGAGGCGGA CTTGCGCCGG
GAGATCGAGG CGGCAGCGGC TGCCACCTGA
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| Protein sequence | MFDAVTGQPQ LAAMRPIFRP ALVNDPFGDP GLYVDFKFEK RALLFDLGDL TALPPKKLLR
VSDVFVSHTH MDHFFGFDRL LRLCLGRNTS LRLYGPPGFA AQVEHKLAGY TWNLVENYPG
DFFMDAWELD ANWQARGTRL RCRNRFRAEP LAARHLPGGV LLDELAFRVR AAFLDHGTAC
LGFAVEEKIH VNVWRNRLAE LGLAVGPWLK ELKDAVLRNA PDATTVRACW RDGSGEHERV
LSLGLLKAAV LRQVEGEKIC YVTDVAFHPD NVQRITALAA NAAQLFIECV FLDQDADHAA
RKHHLTARQA GSIARAAGAK LVIPFHFSPR YADREADLRR EIEAAAAAT
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