Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1221 |
Symbol | |
ID | 3963546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1307718 |
End bp | 1308647 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916035 |
Product | LysR family transcriptional regulator |
Protein accession | YP_522486 |
Protein GI | 89900015 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.678817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGTT CCGCCGAGAT GACCGCTTTT GTCCGCGCCG TCGAAACCGG TGGGTTTACC GCCGCCGCGC GCGAGATCGG TCTGACACCA TCGGCCTTGT CCAAATTGGT GACGCGGCTT GAAGACCGAT TGGGCGCACG ACTGCTGCAA CGCACCACCC GCCGCTTGCA ACTGACCAGC GAAGGCGAGG CTTTCTACGC GCGTGCGCGC CCGATTCTGC TGGCCATGGA TGAAGCCGAG GCCGAGGTCA GTCAGGCCGG ATTGAGCCCG CGTGGCTTGC TGCGCCTGCA ATGTGGAACG GCCTTTGGCA TGCACCAACT GGCACGCACC ATCCCGCATT TCCAGGCTCT TTATCCAGAT GTGCAATTGG ACATCACCAT CAGCGATCGG CCGCCTGCGG ACATGAAGGA AGGCATCGAC CTGACGATCC GCACCGGACC ACTGGACGAC TCCTCCATGG TGGCGCGGCG CATTTGCACG CTGGAGCGGG TGATCTGCGC CGCCCCGAGC TATCTGGCGC TGCATGGCAC GCCGCGCACG CCGGACGATT TGCAGCGGCA CAACTGCCTG TGGATTTCGA ACCTGCCCGC ACTGCGGCGC TGGCCTTTTG ACACCGAAGA TGGCATCCGC GTGGTGCACA TCGGCGGCAA TGTCGTGGCC AACAATGCCG AAACCGTGTT GCAACTGGCG GTGGCGGGGG TGGGTATCAC GCGTCTGACC AACGTCATCG TCAGTGCGGC CATCGCCCGC CGGGAGCTGG TGCCGATCCT GACCGATTGG CACCATGTGG AACCCGTGCC CCTGTTCGCC AGCTACCCCA GCGGTCGCAA TCTGGCGCCC AAGGTGCGGG CGATGGTCGA TTTCCTGGTG GATTTTTTCA AGGACTCAGA CCAGCAATTC CAGCGCGTCA CGCCAGTGGG TTCGCCCTGA
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Protein sequence | MDRSAEMTAF VRAVETGGFT AAAREIGLTP SALSKLVTRL EDRLGARLLQ RTTRRLQLTS EGEAFYARAR PILLAMDEAE AEVSQAGLSP RGLLRLQCGT AFGMHQLART IPHFQALYPD VQLDITISDR PPADMKEGID LTIRTGPLDD SSMVARRICT LERVICAAPS YLALHGTPRT PDDLQRHNCL WISNLPALRR WPFDTEDGIR VVHIGGNVVA NNAETVLQLA VAGVGITRLT NVIVSAAIAR RELVPILTDW HHVEPVPLFA SYPSGRNLAP KVRAMVDFLV DFFKDSDQQF QRVTPVGSP
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