Gene Rfer_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1209 
Symbol 
ID3963534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1295846 
End bp1296241 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content56% 
IMG OID637916024 
Producthistidine triad (HIT) protein 
Protein accessionYP_522475 
Protein GI89900004 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.818472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCA CGCCCAAGCC ATGTCCCTTT TGCACGCTTC CTGACAGCCG AATCGTCGAA 
GAAAATGAAC ACGCCATATT GATTCTGGAT GGTTTCCCAG TGTCCCCTGG CCACAGCCTG 
GTCATTCCAA AGCGACACGT CGCCTCCTTC TTCGAGATAA CGGACATTGA GCGTGCGGCC 
CTTTTCAAGT TACTCGATCG GGCGAAGGAC CTGGTGTCAA ACGTGCACCA GCCAGATGGC 
TACAACATCG GCATCAATGA TGGCGCAGCA GCGGGGCAGA CGGTCCCACA CCTGCATATT 
CATCTCATTC CAAGGTATGA CGGCGACCTG GTCGACCCGC GTGGTGGCGT ACGCTGGGTG 
ATTCCCGACA AGGCTGACTA CTGGACGCAG AGGTAA
 
Protein sequence
MTATPKPCPF CTLPDSRIVE ENEHAILILD GFPVSPGHSL VIPKRHVASF FEITDIERAA 
LFKLLDRAKD LVSNVHQPDG YNIGINDGAA AGQTVPHLHI HLIPRYDGDL VDPRGGVRWV 
IPDKADYWTQ R