| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1168 |
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| Symbol | |
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| ID | 3963552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1250588 |
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| End bp | 1252192 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915984 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_522435 |
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| Protein GI | 89899964 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit
[TIGR03324] alternate F1F0 ATPase, F1 subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.295877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTG CGGAGGACCT GCAAAAGGTT TTCGACAAAG CGTTCGCGGG TATGCGCGAA
GCGCGGGAGG CATTCGCGCC GAGTCTTGCG CCACGGGAAG TTGGCACGAT CACCAGCATC
GCCACCGGGA TTGCGAAGGT GTCCGGGCTC CCCGGCGTGG GTTTTGACGA GCTGGTGAAA
TTTCCCGGCG ATTTGTTCGG TATCGCCTTC AACGTGGACG AGGCTGAAAT CGGCGTCGTG
CTGCTCGGCG AGTATTGGCA TCTGCACGCA GGCGATGAAG TCGATCGCAC CGGCCGGGTC
ATGGACGTTG CAGTGGGCGA CGGGTTGCTG GGACGGGTCA TCGACCCGCT CGGTCGGCCA
CTCGATGGAC GAGGACCGGT GGCCTCCAGC CATCGCTTGC CCATCGAACG CCCCGCTTCG
CCCATCATGG ACCGCGCTCC GGTCACCGTG CCGCTGCAAA CCGGCCTAAA GGTCATTGAT
GCGCTTATTC CTGTCGGGCG TGGGCAGCGC GAGTTGATTC TGGGTGACCG GCAAACAGGC
AAGACCGCCA TTGCTATCGA TACGATTCTT AACCAGCAGG GCCAGAATGT TTTGTGCGTA
TATTGTGCTA TCGGTCAGCG CGCTTCGGCC GTAGCGAAGG TCGTTGCCAC CTTGCGGGAG
AAGGGCGCGA TGGATTTCAC CACCGTGGTG GTTACCGAGG GCAACGACCC ACCAGGTCTC
GCCTACATTG CCCCGTACGC TGCGACCAGC ATTGCGGAGC ATTTCATGGA AGCGGGTCGG
GACGTCCTGA TTGTGTACGA CGACCTTACG CAGCACGCCC GCGCCTATCG CGAGCTTTCC
CTCCTGCTGC GCCGCCCACC CGGACGCGAA GCCTTTCCCG GCGATATTTT CTATATCCAT
TCGCGCCTGC TGGAGCGCGC TACCCATCTG CGCCAGGAAC GCGGTGGCGG CTCGCTCACG
GCTCTGCCGA TCATCGAGAC CCAAGCCCAG AACATTTCCG CCTATATTCC GACCAACCTG
ATTTCCATCA CGGATGGCCA GATCTATCTC TCGCCATCGC TGTTCGAGTT GGGGGTATTG
CCCGCGGTCG ATGTCGGCAA ATCAGTCTCG CGCGTTGGCG GCAAGGCGCA GCGCACAGCC
TACCGGGCTG TGGCCGGCGA CCTCAAGCTC GCTTACGCCC AGTTCGAGGA ATTGGAAACT
TTTGCCCGTT TTGGTGCTCG GCTGGATGAA AACACCACCA AAATTATTGA GCACGGACGG
CGCATCCGGG CCTGTCTCAA GCAGCCTGAA TCCGCGCCGG TGTCGGTGGC CGCACAAATC
GCCGTATTGC TGGCCTTGAG CGCAGAACTC TTCGACGGCG TGGAGCTGAA CCAAATGACC
GAGGCTGAAC AGGCGGTGCG CGCTGCGGCG GCGGACATGC CGGCCGAGGT GCGCGCGCGC
TTCGATTCCG CCGACAAATT GAGCGACGAA GATCGGGAAG CGATTATCCA GATCGCCCGC
GTAGCGCTCG CAAGCTTTCA ACCCGCGCCT GAACCAGAGA CAGCGCCAAA GACCAAAACG
GATATCAAAC CCAAACCAAA GGCGGCCGGC GGGGAATCGT CATGA
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| Protein sequence | MEPAEDLQKV FDKAFAGMRE AREAFAPSLA PREVGTITSI ATGIAKVSGL PGVGFDELVK
FPGDLFGIAF NVDEAEIGVV LLGEYWHLHA GDEVDRTGRV MDVAVGDGLL GRVIDPLGRP
LDGRGPVASS HRLPIERPAS PIMDRAPVTV PLQTGLKVID ALIPVGRGQR ELILGDRQTG
KTAIAIDTIL NQQGQNVLCV YCAIGQRASA VAKVVATLRE KGAMDFTTVV VTEGNDPPGL
AYIAPYAATS IAEHFMEAGR DVLIVYDDLT QHARAYRELS LLLRRPPGRE AFPGDIFYIH
SRLLERATHL RQERGGGSLT ALPIIETQAQ NISAYIPTNL ISITDGQIYL SPSLFELGVL
PAVDVGKSVS RVGGKAQRTA YRAVAGDLKL AYAQFEELET FARFGARLDE NTTKIIEHGR
RIRACLKQPE SAPVSVAAQI AVLLALSAEL FDGVELNQMT EAEQAVRAAA ADMPAEVRAR
FDSADKLSDE DREAIIQIAR VALASFQPAP EPETAPKTKT DIKPKPKAAG GESS
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