| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1161 |
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| Symbol | |
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| ID | 3963467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1246033 |
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| End bp | 1247589 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915977 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_522428 |
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| Protein GI | 89899957 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit
[TIGR03305] alternate F1F0 ATPase, F1 subunit beta |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.652698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGATG AAACAAGTCC CTTAAACCTC GGCACGGTGG TCTCCGTCCG AGGCAGTGTT
GTGGATATAC GGTTTGATGA TGATTTACCG TCGATCCACA CGATACTGCG CGCAAATGAA
GGAGAAATCG TCCTCGAAGT GCTGGCGCAG CATGATGCGC GTCACGTGCG AGCGATTGCG
TTGACCCCCA CGCAAGGCCT GGCGCGCGGC ATGGCAGTGC AGGACACAGG CGGGCCGTTA
AAGGCGCCGG TGGGCAAAGG GAGTCTCTCT CGTATGTTCG ACGTTTTCGG AAACACCATC
GACCGCGAGA CGGCGTTGTC CGATGTTCAA TGGCGTTCTG TGCATCGGGC TCCGCCGCCG
TTGGCACGAC GTTCCACCAA GTCTGAAATC TTTGAAACAG GCATCAAGGT CATTGATGTG
CTAATGCCAC TGGAGCGCGG CGGCAAAGCG GGCTTGTTTG GTGGAGCGGG CGTGGGCAAG
ACAGTGCTGC TCACCGAGAT GATTCACAAC ATGGTCGGGC AACACGAGGG CGTAAGTATT
TTTTGCGGCA TCGGCGAACG CTGCCGCGAA GGTGAGGAGC TCTACCGCGA CATGAAGCAA
GCCGGTGTAT TGCCCAACAT GGTGATGATC TTCGCACAAA TGAACGAACC CCCAGGTGCC
CGTTTTCGCG TCGGCCATGC CGCGCTGACG ATGGCGGAGT ATTTTCGCGA TGACGAGCAT
CGCGATATGC TCCTGCTGAT CGATAATATT TTTCGTTTCA TCCAGGCTGG CATGGAGGTG
TCGGGCTTGA TGGGGCAGAT GCCGTCGCGC TTGGGTTATC AACCCACAAT GGGAACGGAG
CTATCGGGTC TGGAGGAGCG TATCGCCAAC ACCGATACAG GCGCCATCAC CTCAATCCAG
GCGGTGTATG TGCCGGCTGA CGATTTCACC GATCCGGCCG CGGTGCATAC CTTCTCGCAT
CTCTCCGCGT CGATCGTGCT CTCGCGGAAG CGGGCAAGCG AAGGCCTTTA TCCAGCCATC
GACCCGCTGC AATCGAGTTC CAAGATGGCC ACGCCGAGCA TCGTCGGCGC ACGGCATTAC
GGCTTGGCGC AGGAGATCCG GCGCACGCTC GCGCAATACG CGGAACTCAA GGACATCATT
GCCATGCTCG GTCTGGAGCA GCTTTCGCCG GAGGACCGCA ACGTCGTCGC CCGCGCCCGT
CGGCTGGAGC GTTTTCTCAC GCAACCTTTT TTCACGACGG AGCAGTTCAC CGGCCACAAA
GGAAAACTGG TCAGCCTAAA GGATGCGCTG GACGGCTGTG AGCGCATCCT GCGCGATGAA
TTCAAAGACC ACCCAGAGAG CGCGCTCTAC ATGATCGGAA CAATTGACGA AGCGAAGGGA
AAAGCGAAAC CGCCCGCCCC CGCAACCCCT TCTGAACCTG ACTCAAAAAC AGAAGCCAGG
GCCGACCCGA AGCCTGCCGC CGAGTCCCCG GCCAAAGCCA TACCCGGGCC CCATCCGCAA
TCCGGGGCGA AACCGCAACC GGAGACCGAC CATGCCGCTG ACACTCATGA ATCTTAA
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| Protein sequence | MGDETSPLNL GTVVSVRGSV VDIRFDDDLP SIHTILRANE GEIVLEVLAQ HDARHVRAIA
LTPTQGLARG MAVQDTGGPL KAPVGKGSLS RMFDVFGNTI DRETALSDVQ WRSVHRAPPP
LARRSTKSEI FETGIKVIDV LMPLERGGKA GLFGGAGVGK TVLLTEMIHN MVGQHEGVSI
FCGIGERCRE GEELYRDMKQ AGVLPNMVMI FAQMNEPPGA RFRVGHAALT MAEYFRDDEH
RDMLLLIDNI FRFIQAGMEV SGLMGQMPSR LGYQPTMGTE LSGLEERIAN TDTGAITSIQ
AVYVPADDFT DPAAVHTFSH LSASIVLSRK RASEGLYPAI DPLQSSSKMA TPSIVGARHY
GLAQEIRRTL AQYAELKDII AMLGLEQLSP EDRNVVARAR RLERFLTQPF FTTEQFTGHK
GKLVSLKDAL DGCERILRDE FKDHPESALY MIGTIDEAKG KAKPPAPATP SEPDSKTEAR
ADPKPAAESP AKAIPGPHPQ SGAKPQPETD HAADTHES
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