| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1113 |
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| Symbol | |
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| ID | 3964351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1193724 |
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| End bp | 1196324 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915934 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_522385 |
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| Protein GI | 89899914 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0994195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAT CGACCTCTCT GCACTTTGCG ACGCTCATTT CCTGCCTCGC CCTGGGTCTT
GCCTTGAATG GCTGCGCCAC GCGTTCCGCG ACGTCGTCGG TTCCGCTGGC GGACTGGCCC
GCCATCACCA GCGCCATCCC CAGAAACACA CAAATCGAAG CTGAAGTAGC GCGCATTCTT
GCTGGCATGA CATTGCCGCA AAAAATCGGC CAGATGACCC AGCCGGAAAT CAAGAACGTG
ACCCCCGCCC AAGTGACCGA GTACTACATC GGCTCGGTGC TGAACGGCGG AGGCTCCTGG
CCCCAAGGGA ACAAACTGGC ACGCATCACC GATTGGGTGA GCCTGGCAGA CCAGTATTAC
AACGCGTCGA TGGCCACTGA CATGAAGGTC AAAGTGCCAC TGATTTGGGG CACCGACGCG
ATCCACGGCC ACGGCAATGC CCATGGGGCG ACGCTGTTTC CGCACAACAT CGGGCTGGGT
GCGGCGCATG ATCCGGAATT GATTCAGAAC ATCGGCGTTG CGGTCGGGCG TCAAGTGCGG
GCCACGGGTA TTAACTGGGT GTTTGGCCCC ACGCTGGCGG TGGCGCGCGA TGACCGCTGG
GGTCGCACCT ACGAGAGTTT TTCCGAAGAT GCGACTCTGG TCAATGCTTA CGCGGGGGCC
TACGTCACCG GTATGCAGGG CAGTTTTTCG CACGACGGCA ACGTGGTGGC CACAGCCAAA
CACTTCATCG GCGATGGTGG CACTGATCGG GGCCAGGACC AGGGCGTTGC CACGGTCAGT
AAGGCAGAAA TGATCAACGT CCATGCTCAG GGCTACTACG GTGCGTTGGC TGCAGGCGCG
CAAGCCGTGA TGGCGTCCTT CAACAGTTGG AATGACGTGG CCGCAGGCGT CGACTACGGC
AAGTTGCACG GCAGCAAGGC TCTGCTGACG CAGGCCCTCA AGCAAAAAAT GGGCTTTGAC
GGTTTTGTCG TCTCCGACTG GAACGGCATT GCCCAGGTGC CCGGCTGCAC CCAGGCCAGT
TGTGCACAGG CCATCAATGC CGGCATTGAC ATGGTGATGG TGCCCGACAA TTGGCGCGCC
TTCATTGCCA ACACGATGGA GCAGGTGAAC CGTGGCGAAA TTCCGATGGC CCGCATTGAC
GATGCAGTGT CGCGCATTTT GCGAGTCAAG CTGCGCGCCG GGATGTTTGG CAAGAAGCCA
TCACAAGGCA TCTACGCCGG CAAACCCGAT GCCCTGCTGG CGCGTGACTT GGCGCGCCAG
GCGGTGCGCG AGTCGCTGGT GCTGTTGAAG AACAACCATG CGATATTGCC CCTGGCCCGT
GGTCAGCGCA TATTGGTGGT CGGCAAATCC GCCGACAGCC TGCAAAACCA GACCGGCGGG
TGGACGCTGG GCTGGCAGGG AACCGGCAAT GCAAATACCG ATTTCCCCAA CGCCGACAGC
CTGCTGGACG GCATCAGGGC CGCTGTCGGT AGCTCCAACG TGGCGTTCAG TGAAGCCGCC
GAGGGCATGG ACGTCAGCCG CTTTGATGCC GTGATCGCCA TCATTGGCGA GACCCCCTAT
GCAGAAGGCA ATGGTGACAT CGCGGTGTCC GACACCTTGC GGCACAGCCG CCGTTACCCG
GAAGACCTGG CTGTGCTCAA GGCCGTTGCC GGCAAGGGGG TCCCGGTTGT TACGGTTCTG
GTGACGGGTC GACCGGTGTA CGCGAACGAT TTGCTCAACC TGTCGAACGC CTTGGTCGTG
GCCTGGCTGC CTGGGACTGA AGGCAAAGGG GTGGCCGACG TATTGATCCG AAACTCCGCC
GGTGGGATCC ATCATGACTT CACGGGACGA CTTTCATTTT CCTGGCCCAA GTCCGCGTGT
CAGACCCCGT TGAACTTTGG CGACACGGGC TACGCGCCCC TGTTTGCTCC TGGCTATGGC
TTGAACTACC AAAGCACCGT CACAGTGGGC GCGCTCGACA GCACTGCGGC GCCGGGCGGA
TGCGGGCATG AGGATGGTGT GCCGATTTTT AACCGCTCGG ATCGCGCGCC TTATGCACTG
CATGTTGCCA GCGCGGCCAA TAACTGGGTT AAGGTCCCAG TTGGTGCCGA CCTCAATGCC
GCGCTGAATC TTCCCCTCAG TCAGCCAAGC ATCCGGGTGG AAACGACACA GATCAATACC
CAGCAAGACG CCAAACTCGT GACCTGGCAT GGCGGCCCGG CCCGCTATCT ATCGTACGCG
CCGCAGCCGG CGAGCCTGCG TACCTACGCA GCAAATCAAG GGGTGTTGCA GTTCGATATG
GCGGTGATGC AGGAACCGCA GGGCTCCGTG ACGTTGGCGA TCGAGTGTGG CGAGTCGTGC
CGGGGTGAGG TGGATATCAC TGCCTTGCTC AAAAAGTCTG CGCCCCTGAC AAAGCACACC
GTGAAGATCC CGCTACTGTG TTTTGAGGCC AAGGGGACAA ATTTTGACAA CGTAGATGTG
CCGTTTAGTG TGTTAACGTC ACAATCCTTT TCTGCGGCAT TTGCCAACAT CCAGATCGTC
TCAGGGGCGG CGAAGGATGC GGATACCTTG ACATGCTCAG ATGTCGGGGG TGAATTTCAA
ATAGGGGAGC AGCACAAATG A
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| Protein sequence | MTKSTSLHFA TLISCLALGL ALNGCATRSA TSSVPLADWP AITSAIPRNT QIEAEVARIL
AGMTLPQKIG QMTQPEIKNV TPAQVTEYYI GSVLNGGGSW PQGNKLARIT DWVSLADQYY
NASMATDMKV KVPLIWGTDA IHGHGNAHGA TLFPHNIGLG AAHDPELIQN IGVAVGRQVR
ATGINWVFGP TLAVARDDRW GRTYESFSED ATLVNAYAGA YVTGMQGSFS HDGNVVATAK
HFIGDGGTDR GQDQGVATVS KAEMINVHAQ GYYGALAAGA QAVMASFNSW NDVAAGVDYG
KLHGSKALLT QALKQKMGFD GFVVSDWNGI AQVPGCTQAS CAQAINAGID MVMVPDNWRA
FIANTMEQVN RGEIPMARID DAVSRILRVK LRAGMFGKKP SQGIYAGKPD ALLARDLARQ
AVRESLVLLK NNHAILPLAR GQRILVVGKS ADSLQNQTGG WTLGWQGTGN ANTDFPNADS
LLDGIRAAVG SSNVAFSEAA EGMDVSRFDA VIAIIGETPY AEGNGDIAVS DTLRHSRRYP
EDLAVLKAVA GKGVPVVTVL VTGRPVYAND LLNLSNALVV AWLPGTEGKG VADVLIRNSA
GGIHHDFTGR LSFSWPKSAC QTPLNFGDTG YAPLFAPGYG LNYQSTVTVG ALDSTAAPGG
CGHEDGVPIF NRSDRAPYAL HVASAANNWV KVPVGADLNA ALNLPLSQPS IRVETTQINT
QQDAKLVTWH GGPARYLSYA PQPASLRTYA ANQGVLQFDM AVMQEPQGSV TLAIECGESC
RGEVDITALL KKSAPLTKHT VKIPLLCFEA KGTNFDNVDV PFSVLTSQSF SAAFANIQIV
SGAAKDADTL TCSDVGGEFQ IGEQHK
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