| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1086 |
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| Symbol | |
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| ID | 3963509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1160937 |
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| End bp | 1161899 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915907 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_522358 |
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| Protein GI | 89899887 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.157723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACATT CTGAAAACCA TCTGCGCACG CGCCCCATTT CGGTCGGTCA GTTGCGCGCC
TTCGAGGCCG TGGCGCGCCA TCTCAACTTT CGCGCCGCGG CTGATGACTT GTCGCTGACC
CAAAGCGCCG TCAGCCGCCA GATTCAGGCG CTGGAAGATG AAGTGGGGGT CGGTCTTTTT
TTACGCCACA CGCGCGCCGT CGAGCTCACC AGCGCGGGCG CCCAGTTGCT GCGCGCCGTG
TCGCCGTCAC TGGAACGCAT GGACAGCGCG GTGCGCCTGA TCCGGCGCAG CGCCGGACGC
AAAAGCGTGG CCATCAGCAC CTGGGCCTCG TTTGCCTCCA TGTGGCTGAT CCCGCGGCTG
GAGGCCTTCC AGAGCGAGCA CCCTGACATC GACATTCGGA TTGACGCCAC GGATGTGTCG
GTCGATCTGG ACACCACCGA CATCGACCTG GCGCTGCGCT ACACCCTGCC TTCCAGCGTG
CCCTCCAATG CCGTGCGCCT GTTCGGCGAG CAACTGACCC CCGTGGCCAG CCCCTGGCTG
CTCAAGAGTG GACACCCTCT GAAGCGAGGT GAAGACCTGG CGCATTTCGC CTTGATCGAA
GCCAGCGACG CGAACCGCAC ACTACATCTG GAGTGGCTCA CCTGGCGCCG CTGGCTCGAT
GAGCACGATT TCAAGAAGCT GGAACCGAAG CGCTGGCTTT ATTTCAACTA TGCCCACCAG
ATTGTGCAGG CCGCGTTGAC GGGCCAAGGC GTGGCACTGG CCCGTACGCC ACAGGTGGCA
GACAGCCTGG CCTCAGGCGA CCTGGTTGAG GTTTTACCGG GCATGCGCCT GGACTCGCCC
CTGGCCTACT GGCTCATCGT CAGCCCGCGC AGCGCGGCGC GCCCCGAGAC CCGTGCCTTT
TGCGACTGGC TGATGGCTCA GGCCGCGCTC ACGCGCCAGG CGACAGGCGA GGCGCTGGCA
TAG
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| Protein sequence | MQHSENHLRT RPISVGQLRA FEAVARHLNF RAAADDLSLT QSAVSRQIQA LEDEVGVGLF
LRHTRAVELT SAGAQLLRAV SPSLERMDSA VRLIRRSAGR KSVAISTWAS FASMWLIPRL
EAFQSEHPDI DIRIDATDVS VDLDTTDIDL ALRYTLPSSV PSNAVRLFGE QLTPVASPWL
LKSGHPLKRG EDLAHFALIE ASDANRTLHL EWLTWRRWLD EHDFKKLEPK RWLYFNYAHQ
IVQAALTGQG VALARTPQVA DSLASGDLVE VLPGMRLDSP LAYWLIVSPR SAARPETRAF
CDWLMAQAAL TRQATGEALA
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