| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1081 |
|---|
| Symbol | |
|---|
| ID | 3963504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1155899 |
|---|
| End bp | 1156384 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637915902 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_522353 |
|---|
| Protein GI | 89899882 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACG CCAACCTTGA TTCAATCGAT TTGCAGTTGC TGGCACAGCT GCAGATTGAC
GCCTCGCTGA CCAATCAGGA TCTCGCGGCG CGGGTGCATG TGTCGCCACC GACCTGTTTG
CGCCGGGTCA AGCGGCTGCG CGATGCGGGC CTGATCGAGC GGGTGATCGC TGTGCTGAGC
GTGGACAAAC TCGCTGACGT AGCGGGCTTT GGCCTGTGTG CGTTGACCGA GATCACACTG
GACCACCAGG ACAACCAGGC GCTCGAAGCA TTCGAGCAAC GCGTCTCCCT GGAGGATGCC
GTGCAGCAGT GTTACCGCGT GTCGCCGGGG CCGGACTTTT GCCTGGTGGT GCAGGTCGCG
CAGATGCCTG ACTATCTGGC GCTGGCGCAG CGCTTGTTCA CGGCGGATGC CAATGTGCGC
AACGTCAAAA CTTTTTTCAG CGTCAAGCGC AGCAAATTTG GCGCGCGGGT GGCGCTGCCA
TTGTGA
|
|---|
| Protein sequence | MEHANLDSID LQLLAQLQID ASLTNQDLAA RVHVSPPTCL RRVKRLRDAG LIERVIAVLS
VDKLADVAGF GLCALTEITL DHQDNQALEA FEQRVSLEDA VQQCYRVSPG PDFCLVVQVA
QMPDYLALAQ RLFTADANVR NVKTFFSVKR SKFGARVALP L
|
|---|
| |