| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1063 |
|---|
| Symbol | |
|---|
| ID | 3963759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1135163 |
|---|
| End bp | 1136206 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637915884 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_522335 |
|---|
| Protein GI | 89899864 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCATT GCTTTGACGG GGTGACGGCT GACGAAGTGT GGCGCAAGGC GATAGCAAAG
CTGCAATCCG ACGAGTCCAA TTCCGCAGGA AGCCGGCTTG GCCGCATGCG CGAGTTGCTT
CATTGTGCTC TTTGCATTAA GGATCCCCGA CAACGATGGG TATTGTCGCG TCGGCCTGCG
ATAAACCCAG CCTTTGCAAT AGCTGAAGTG ATCTGGATAT TGCTTGGAAG CGATGCTTCG
AATTTCCTAA ACTTTTGGAA TCCCGTTCTG CCAAAATACG CCGGCTCCGG TGGAACCTAT
CACGGCGCAT ACGGCGCTCG ATTGCGCACT CATTTTGGGC TGGATCAGAT CGAGCGCGTC
TACCAAATAT TGTCGGCCAA TCCGGAGTCA CGACAAGCTG TGCTTCAGAT CTGGGACAGC
AGAGAAGATT TGCCACTCTC GGATGGTGCT AGTCGCGATC TGGATATCCC GTGCAACTTG
GTGGGCATGC TGAAGGTTCG AGCACAAAAG CTGGAGTGGT TACAAATCAT GCGCAGCAAT
GACGTCTTTC TTGGCACTCC CCATAATCTT GTGCAGTTCA CTTCGTTGCA AGAGATTATT
GCTGGTTGGT TAGGCATTGG AATTGGGTCT TTCTCACTTG TGACAGATAG CCTTCACCTA
TATGAGCATG ACTATGATCG ATGCTCAATG ACGAAAGTCC CCTCTACTGC CATAAGCACC
GATTCAATTG CACTGTCAAG GCAGGATTTC AATAGAACTC TTCCCCTTTT GGAGTACGCA
ACGAATGAGA TGAGATCAGA GTTTCTAACG CCCGCTCGCT TGATAGACTT CGTTGACACT
CTAGGAATCT CCGAAGGCTG GGCTAATTAC ATTTATATTG TCGCGGCTGA TACCGCTCGT
CGGCGATCCT GGTTCGATGA AATGCACATC GTCGCCAACA AGTGCTCCAA TTTAGCATTG
CAGGCGGCTT GGCAGGCTTG GTTAGCTCGG TGCACAGAGC ACCAGGCAAC TCAATCCCAC
CCAGCGAACG GCGTTGTTGC ATAA
|
|---|
| Protein sequence | MFHCFDGVTA DEVWRKAIAK LQSDESNSAG SRLGRMRELL HCALCIKDPR QRWVLSRRPA
INPAFAIAEV IWILLGSDAS NFLNFWNPVL PKYAGSGGTY HGAYGARLRT HFGLDQIERV
YQILSANPES RQAVLQIWDS REDLPLSDGA SRDLDIPCNL VGMLKVRAQK LEWLQIMRSN
DVFLGTPHNL VQFTSLQEII AGWLGIGIGS FSLVTDSLHL YEHDYDRCSM TKVPSTAIST
DSIALSRQDF NRTLPLLEYA TNEMRSEFLT PARLIDFVDT LGISEGWANY IYIVAADTAR
RRSWFDEMHI VANKCSNLAL QAAWQAWLAR CTEHQATQSH PANGVVA
|
|---|
| |