Gene Rfer_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1038 
Symbol 
ID3963637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1097445 
End bp1098128 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID637915860 
ProductAsp/Glu racemase 
Protein accessionYP_522311 
Protein GI89899840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA CGGTGGCGTC GAGGCGCCCA CGTATTGCGC TGATCCATGC GCTCGCACAG 
TCGGTCCAAC CGATCAATGA GGCCATGGTC CGGGACTGGC CCGCTGCCAC TCGCATGAAC 
TTGCTCGACG ACAGCCTGTC CGCAGACTTG GCGGCCAGCG GGCGCGGACT CGATGCCGCC 
ATGCAAGAGC GCTTTCAATG CCTTGCCCAC TACGCGCTGG ACTGTGGCAG TGATGCGATC 
CTGTTCACTT GTTCGGCCTT CGGACCCTGC ATCGAAGAGG TTGCGCAGCT GCATCCAACG 
GTGCCGGTGC TCAAACCCAA CGAAGCGATG ATCAAGGATG CTGCTGCGCT GGGCCGGCGC 
GTGGGGCTGG TTGCCACTTT TACCCCGACC CTAGAGTCGA TGCCGCCGGA ATTCCCGCGT 
GTTGTCCCGC TCGATTGCCG GCTCGCCGAG GGTGCTCTGG CGGCCTTGAA CGACGGCAAC 
GGCGAACTGC ACGATCAGCT GATCGTAGCG GCTGCCGTCA GCTTGGCGGC CCGTGGCTGC 
GAGGTGATTG CACTGGCCCA GTTCAGCATG GCGCGAGCGA AGTCGCTGGT GGAAAGGCGC 
ACCGGTTTGC CGGTGCTGAC CACGGTAGAC AGTGCCGTGG CCGAGTTGAA ACGCCGCGTG 
GACGGAGTCG CTCTCAGGCC TTGA
 
Protein sequence
MNTTVASRRP RIALIHALAQ SVQPINEAMV RDWPAATRMN LLDDSLSADL AASGRGLDAA 
MQERFQCLAH YALDCGSDAI LFTCSAFGPC IEEVAQLHPT VPVLKPNEAM IKDAAALGRR 
VGLVATFTPT LESMPPEFPR VVPLDCRLAE GALAALNDGN GELHDQLIVA AAVSLAARGC 
EVIALAQFSM ARAKSLVERR TGLPVLTTVD SAVAELKRRV DGVALRP