| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1029 |
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| Symbol | |
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| ID | 3963628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1089099 |
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| End bp | 1089896 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637915851 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_522302 |
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| Protein GI | 89899831 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000261026 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCAAT CAAAAAAAAT CATTTCCGCA TTGGCAATTG CCCTGGTAGC CATATGCACA
TCTGTGCAGG CCGACACCTT GGCCAACATC AAGCAGAGAA ATAAGGTACT CGTCGGCATC
GATCTGACCT TTGCACCCTT TGGCAGCATG GACGCTGCAA TGAAACCTAT GGGGTCTGAT
GTGTCTGCGG CGAAGATGCT GGCCAAAGAT CTGGGCGTGG AATTGGAAAT TGTTCAACTG
ACCGGACCCA ACCGTGTCCC TTATCTCCTG ACCGGCAAGG TGGACATGGT CATCTCCTCG
TTCAGTATCA CGCCAGAACG CAAGAAAGTG ATTGACTTCA GCGTTCCCTA CAGTGTTTCG
GAGTCAGTGA TTCTGGCGCC CAAATCAGTC CAAATCACCA AGTTGCAGGA CCTCGCAGGC
AAACGTATTG GCCTGGTCCG CGGCAATCTC CAGGAAAACC TGCTCAAGCC CATCGCCCCC
GAAGGCATGA TACCGGTACG CTTCGATGAC GATGCGTCCA ACGTAGTGGC CCTGTTGTCG
GGACAAGTAG ATGCACTGGG CGGCTCGAAG GAGCTGCTAC CCAACATTGC CAAGCAAAGC
CCCGAGAAGC AGGTAGAGTC GAAGCTCTCC ATTGGCATTC TTCCCCACGG CATTGGCATT
CGTAAGGAAG ACACGTCACT ACTGAACTGG ACCAATCAGT GGGTGATGGC TAACCTGAAG
AACGGTCGCC TGAGCAATTC GTACAAAGAG GCCGTGGGAT TCCCCTTGCC TGACATGAGC
CAATTCATGC CCAAGTAA
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| Protein sequence | MIQSKKIISA LAIALVAICT SVQADTLANI KQRNKVLVGI DLTFAPFGSM DAAMKPMGSD
VSAAKMLAKD LGVELEIVQL TGPNRVPYLL TGKVDMVISS FSITPERKKV IDFSVPYSVS
ESVILAPKSV QITKLQDLAG KRIGLVRGNL QENLLKPIAP EGMIPVRFDD DASNVVALLS
GQVDALGGSK ELLPNIAKQS PEKQVESKLS IGILPHGIGI RKEDTSLLNW TNQWVMANLK
NGRLSNSYKE AVGFPLPDMS QFMPK
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