Gene Rfer_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1020 
Symbol 
ID3963735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1076800 
End bp1077192 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content56% 
IMG OID637915843 
Producthypothetical protein 
Protein accessionYP_522294 
Protein GI89899823 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.116113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATAC TCGTAGCTTA TGCGCCACGT CCCGAAGGGC AGGCTGCATT GGACAAAGGC 
ATAGAAATTG CCAGAAGCCG GAAGGAACGC TTGGTGGTCG TCAATGCGGG ACCTGGGGGC
TCAAAAGATG ATGCCTCTCT GGCGGAAGTC GCAGATGTCG AACGAGTTGA GGCATTGCTT
GCAGCGTCGG GTCTTGAGGC GGAATTCAAG CAGTTTGTTC GGGGCGCGAG TGCCGTCTCG
GAAATTGAGG CCCTGATCGA CTCTCTGCAT ATCTCATTGC TGGTCATCGG ACTGCGAAAA
CGCACCGCTG TGGGCAAACT CATTATGGGG AGCGTAGCGC AGGACATTCT GCTTTCTGTC
TCATGCCCGG TATTGGCAGT GAAAGCCGGC TGA
 
Protein sequence
MTILVAYAPR PEGQAALDKG IEIARSRKER LVVVNAGPGG SKDDASLAEV ADVERVEALL 
AASGLEAEFK QFVRGASAVS EIEALIDSLH ISLLVIGLRK RTAVGKLIMG SVAQDILLSV
SCPVLAVKAG