| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0978 |
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| Symbol | |
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| ID | 3963577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1027160 |
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| End bp | 1028626 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915802 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_522253 |
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| Protein GI | 89899782 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAA ACTTTGACCT TTTGATCCGC AACGCAAGCA TTGTCGACGG CACGGGCGCC
CCCCGTTTCA CGGGCGACAT CGGCATTCGT GGCGAGCGCA TCGCGCGCAT CGGCGATCTC
TCAAAGCTGC GTGGTGCGCT GGAGATCGAT CTGGCGGGTC GCATTGCGGC GCCGGGCTTC
ATCGACGCGC ACACCCACGA CGACCGATTC ATGCTGTCCA ACCCCGACAT GGCGCCAAAA
ATCAGCCAGG GTGTGACCAC GGTGATCGGC GGCAATTGCG GCGTCTCACT GGCGCCGATG
CCGCGCCCCA TTCCCGATCC GGTCACGCCA CCCCTGAACC TGCTCGACGG CGATGGCGAG
TGGTTCCGTT TTCCCAGTTT CGCCGCCTAC CTGGATGCGC TGCGCGCCCA GCCGGCCGCC
ACCAACTGCG CGATGCTGGT GGGCCACACC ACCTTGCGCG TGGCCACCAT GGATGACCTG
ACGCAGCCGG CGACGCCGGC CGAAATCGGC GCCATGCGCG AGCTGGTCGA CGAGGCCATG
CGCGCGGGCG CCATCGGTGT GTCCACAGGG CTGTTCTACG AACCGGCAAT TGCCGCGCCC
ACGGAGGAGA TCATCGAGAT CTGCCGACCG CTCAAGGAGT TCAACGGCCT GTACTGCACC
CATATGCGCG ACGAGGCGGA CCGGGTGCTC GACTCGCTGG AGGAAAGCTT TCGCATCGGC
CGCGAGGTCG GGGTGCCGGT GGTGATCTCG CACCACAAGC TGGTGGGACA GGCGAATTAC
GGTCGCTCCG AGGAAACGCT GTCCTTCATC GAAAAAAACA TGGCCAAGCA GCCGATCTGC
CTGGACTGCT ATCCCTACAC TGCCGGTTCC ACCATCCTGT CCGCCGACCG GGCGGCCACT
TCCACACGGG TCATTGTCAG TTGGTCGAAA GCGCTGCCCG AGCATGCCGG CCAAGACCTG
GCCGACATCG CGCAGAAGAT GGGCGTCTCC CAGGACGAAG CCGTGCAACG CCTGCTACCC
GCTGGCGCGA TCTACTTCCG GATGGACGAA GCCGATGTGC AGCGAATTCT GAAGTTCGAC
CAGACCATGA TCGGCTCCGA CGGCCTGCCG CATGACGCGG CACCGCATCC GCGCCTGTGG
GGCAGCTTTG CACGCGTGCT GGGCCACTAT GGCCGCCTGC TCGGGCTGTT CCCGCTTGAG
ACTGCCGTGC ACAAGATGAC TGGCCTAACG GCGAAGAACT TTGGCCTGAA AGACCGCGGC
GTGCTGAAGG AAGGCGCCTA CGCCGATTTG ACCCTGTTCA ACGCCGACAC GGTGGACGAG
GTCGCCACCT ATGAGAAGCC GATTGCGCCG GCACGCGGCA TCGACACGGT GATCGTCAAT
GGCGCCGTGG TCTGGCGCGA CGGCCGCTCG ACCGGCGCGC GCCCCGGGCG GGTGCTGGCG
CGCGAACCGC AAGAGACAGG AAGCTGA
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| Protein sequence | MQENFDLLIR NASIVDGTGA PRFTGDIGIR GERIARIGDL SKLRGALEID LAGRIAAPGF
IDAHTHDDRF MLSNPDMAPK ISQGVTTVIG GNCGVSLAPM PRPIPDPVTP PLNLLDGDGE
WFRFPSFAAY LDALRAQPAA TNCAMLVGHT TLRVATMDDL TQPATPAEIG AMRELVDEAM
RAGAIGVSTG LFYEPAIAAP TEEIIEICRP LKEFNGLYCT HMRDEADRVL DSLEESFRIG
REVGVPVVIS HHKLVGQANY GRSEETLSFI EKNMAKQPIC LDCYPYTAGS TILSADRAAT
STRVIVSWSK ALPEHAGQDL ADIAQKMGVS QDEAVQRLLP AGAIYFRMDE ADVQRILKFD
QTMIGSDGLP HDAAPHPRLW GSFARVLGHY GRLLGLFPLE TAVHKMTGLT AKNFGLKDRG
VLKEGAYADL TLFNADTVDE VATYEKPIAP ARGIDTVIVN GAVVWRDGRS TGARPGRVLA
REPQETGS
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