Gene Rfer_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0970 
Symbol 
ID3963569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1020016 
End bp1020792 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID637915794 
ProductIclR family transcriptional regulator 
Protein accessionYP_522245 
Protein GI89899774 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCG CCGAACAGCT ACCGCCCATT CGGCGATCTC GCGGCCTGGA TCGCGCATTT 
GAAATTCTCG ACTACTTCCG CGTCCAACGC AAACCGATGC GCCCAAATGA AATTGCTGCG
CATATCGGGG CCCCTCGTTC ATCGGTGTAC GAACTGGTGA ATTTGCTACT GAAGCATGGC
GTGCTCGAAT ATCGCGGTGA CGACGGACAA GTCTTCCTCG GTCGCAAACT GTATTTTCTC
TACAGTGCGT ATGCGGAACA GTTCGACCCA ATGCGGGAGT GCGAATCGTC ACTGACACGC
ATCACGGAAG CAACACGGGA AACCTCCCAA CTTTGCATGC TTGACGGCAA TAAATACACC
GTTGCACTGA TGAAAGAGGG CATACGGCCA TTCCGTATTT CCTCAAATGT TGGCGAAGCC
ATACCGATTC CATGGACCGC ATCTGGGCGA CTGTTGGTAT CACATATGTC AGACATGGAA
ATACGGAACT TCATTCCACA TGAAGATTTC AAGCTGCCAA GCGGGACGTG GCTACAACCG
GGAGTATTCA TTCAACAGGT GCGTAAAGCT AGTGCGGAGG GGTACTTTAC CTTCGATAGC
ATTGTCGACA GTTTTACGCA TTGCTTTGCA GTTCCGGTGT ACGAGAAGGA CGGAAAGTGT
TTTGCCACAC TCTGCTTGGT GGCTCCTAAG GAGGATGGTG CAAAGAATCG AGAAATGTAC
CTGCGCAGCC TGATGGATGT CGCAATTGAC TTGACGCAGA GACTAAAGAC TGTGTGA
 
Protein sequence
MTVAEQLPPI RRSRGLDRAF EILDYFRVQR KPMRPNEIAA HIGAPRSSVY ELVNLLLKHG 
VLEYRGDDGQ VFLGRKLYFL YSAYAEQFDP MRECESSLTR ITEATRETSQ LCMLDGNKYT
VALMKEGIRP FRISSNVGEA IPIPWTASGR LLVSHMSDME IRNFIPHEDF KLPSGTWLQP
GVFIQQVRKA SAEGYFTFDS IVDSFTHCFA VPVYEKDGKC FATLCLVAPK EDGAKNREMY
LRSLMDVAID LTQRLKTV