Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0964 |
Symbol | |
ID | 3963602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1014597 |
End bp | 1015868 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637915788 |
Product | D-serine deaminase |
Protein accession | YP_522239 |
Protein GI | 89899768 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000714853 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCG ATTTCACACT CGATCACAAA TACAAAAGTT ATCCATTTAG TGCCTCTCCT TGTAAGGCCA GTGAGTTGGC CACCAAGGGC TGGAATGTGT TGGCCAATGA CTTGCCGTTC CCGCTAGCCG TTATTAGCCG CAGCGCCTTG GCACACAACG TGGCTTGGAT GCAGGACTAT GCAACGCGCA AGGGTGTGGC GATAGCGCCG CACGGCAAAA CGACCATGTC ACCGCAACTG TTTCGGCAGC AGCTTACGGC TGGTGCCTGG GGTCTGAGCT TCGCCACCAT GTACCAGTGT GCAGTGGGAA TTGAGGCTGG GGCACGTCGT ATCATCATCG CCAACCAGGT TGTGAGCGAC GCTGATTTCG ATGCGCTGGC TTCCTTGCTG GCGAGCCATT CGGACTTGCG AATTTGGTTT CTCGTTGATT CACTTGCTCA ATTGACTTTG ATTGAGGACT GGGCAACACG CCGTGCTGTT CTGATGCCCT TTGACGTCCT TCTGGAGATG GGCATACCGG GCCAGCGCAC CGGATGTCGT ACGCTAGAAG AGGCCCTGAA CTTGGCGCGT GCATTGACCA AGTCCACTGC GGTCCGGCTT GGCGGCGTCG AATGTTATGA AGGCGGTGTG GCCAATTGCG ACAGCGAGCA CGATGCTCGA GAAGTCACGG CACTGGTGCG CCGCGTGATC GAAGTTGTTC GGACCTGCGA TGCGCAAAAC ATGTTTGACG GGGATGAATT ACTGGTAACC GCCGGTGGCT CGGCGGTGTT TGACCTGGTG CTGCCGCTGC TTCGACTGGA AGGTTTGACG CACCCCATGC TGGGTGTGCT GCGTTCCGGT TGCTACATCA CACATGACCA CGGCAATTAT GCGCGGTTTT TGCGTCAATT GGAAAAACGT GAAGGCCTCG ACGCGTCACT GAGGGCCGCA TTGGAAGTCT GGACAATGGT GCAGTCGGTG CCTGAACCAG GATTAGCCCT GCTCACCTGC GGTCGACGCG ATATTTCTTA CGATTTGGAG ATGCCTTTGC CCCAACGCCA CGCACCACGT GGACTACGAC AAGCAAATGC CGTTCCGACA GACTGGAAAA TCAGCGCCCT CAATGATCAA CACGCCTACC TTCGATTCGA TCCTACGGGG CTCGTTCCCC AAGTCGGTGA TCGTGTGGGT CTTGGCATTT CTCACCCTTG TACCACCTTT GACAAATGGC GTTGGTTACC TTTGGTAGAG GACGACTTGT CAGTGACGGG CGCAGTAAAT ACTGCGTTTT GA
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Protein sequence | MNTDFTLDHK YKSYPFSASP CKASELATKG WNVLANDLPF PLAVISRSAL AHNVAWMQDY ATRKGVAIAP HGKTTMSPQL FRQQLTAGAW GLSFATMYQC AVGIEAGARR IIIANQVVSD ADFDALASLL ASHSDLRIWF LVDSLAQLTL IEDWATRRAV LMPFDVLLEM GIPGQRTGCR TLEEALNLAR ALTKSTAVRL GGVECYEGGV ANCDSEHDAR EVTALVRRVI EVVRTCDAQN MFDGDELLVT AGGSAVFDLV LPLLRLEGLT HPMLGVLRSG CYITHDHGNY ARFLRQLEKR EGLDASLRAA LEVWTMVQSV PEPGLALLTC GRRDISYDLE MPLPQRHAPR GLRQANAVPT DWKISALNDQ HAYLRFDPTG LVPQVGDRVG LGISHPCTTF DKWRWLPLVE DDLSVTGAVN TAF
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