Gene Rfer_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0964 
Symbol 
ID3963602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1014597 
End bp1015868 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID637915788 
ProductD-serine deaminase 
Protein accessionYP_522239 
Protein GI89899768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000714853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCG ATTTCACACT CGATCACAAA TACAAAAGTT ATCCATTTAG TGCCTCTCCT 
TGTAAGGCCA GTGAGTTGGC CACCAAGGGC TGGAATGTGT TGGCCAATGA CTTGCCGTTC
CCGCTAGCCG TTATTAGCCG CAGCGCCTTG GCACACAACG TGGCTTGGAT GCAGGACTAT
GCAACGCGCA AGGGTGTGGC GATAGCGCCG CACGGCAAAA CGACCATGTC ACCGCAACTG
TTTCGGCAGC AGCTTACGGC TGGTGCCTGG GGTCTGAGCT TCGCCACCAT GTACCAGTGT
GCAGTGGGAA TTGAGGCTGG GGCACGTCGT ATCATCATCG CCAACCAGGT TGTGAGCGAC
GCTGATTTCG ATGCGCTGGC TTCCTTGCTG GCGAGCCATT CGGACTTGCG AATTTGGTTT
CTCGTTGATT CACTTGCTCA ATTGACTTTG ATTGAGGACT GGGCAACACG CCGTGCTGTT
CTGATGCCCT TTGACGTCCT TCTGGAGATG GGCATACCGG GCCAGCGCAC CGGATGTCGT
ACGCTAGAAG AGGCCCTGAA CTTGGCGCGT GCATTGACCA AGTCCACTGC GGTCCGGCTT
GGCGGCGTCG AATGTTATGA AGGCGGTGTG GCCAATTGCG ACAGCGAGCA CGATGCTCGA
GAAGTCACGG CACTGGTGCG CCGCGTGATC GAAGTTGTTC GGACCTGCGA TGCGCAAAAC
ATGTTTGACG GGGATGAATT ACTGGTAACC GCCGGTGGCT CGGCGGTGTT TGACCTGGTG
CTGCCGCTGC TTCGACTGGA AGGTTTGACG CACCCCATGC TGGGTGTGCT GCGTTCCGGT
TGCTACATCA CACATGACCA CGGCAATTAT GCGCGGTTTT TGCGTCAATT GGAAAAACGT
GAAGGCCTCG ACGCGTCACT GAGGGCCGCA TTGGAAGTCT GGACAATGGT GCAGTCGGTG
CCTGAACCAG GATTAGCCCT GCTCACCTGC GGTCGACGCG ATATTTCTTA CGATTTGGAG
ATGCCTTTGC CCCAACGCCA CGCACCACGT GGACTACGAC AAGCAAATGC CGTTCCGACA
GACTGGAAAA TCAGCGCCCT CAATGATCAA CACGCCTACC TTCGATTCGA TCCTACGGGG
CTCGTTCCCC AAGTCGGTGA TCGTGTGGGT CTTGGCATTT CTCACCCTTG TACCACCTTT
GACAAATGGC GTTGGTTACC TTTGGTAGAG GACGACTTGT CAGTGACGGG CGCAGTAAAT
ACTGCGTTTT GA
 
Protein sequence
MNTDFTLDHK YKSYPFSASP CKASELATKG WNVLANDLPF PLAVISRSAL AHNVAWMQDY 
ATRKGVAIAP HGKTTMSPQL FRQQLTAGAW GLSFATMYQC AVGIEAGARR IIIANQVVSD
ADFDALASLL ASHSDLRIWF LVDSLAQLTL IEDWATRRAV LMPFDVLLEM GIPGQRTGCR
TLEEALNLAR ALTKSTAVRL GGVECYEGGV ANCDSEHDAR EVTALVRRVI EVVRTCDAQN
MFDGDELLVT AGGSAVFDLV LPLLRLEGLT HPMLGVLRSG CYITHDHGNY ARFLRQLEKR
EGLDASLRAA LEVWTMVQSV PEPGLALLTC GRRDISYDLE MPLPQRHAPR GLRQANAVPT
DWKISALNDQ HAYLRFDPTG LVPQVGDRVG LGISHPCTTF DKWRWLPLVE DDLSVTGAVN
TAF