| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0922 |
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| Symbol | |
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| ID | 3963676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 968817 |
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| End bp | 971000 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915749 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_522200 |
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| Protein GI | 89899729 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCTT ATTCTTTGGT TGCGGTGAAA TCCTTGTCCT TGTCCCTGTC CTTGCTGCGT
CGTCTATCCT GGCAGCGCTG GTTGCGCTGG AGCCTGCTGG CGCTGGTCAC CGGGGTGGTG
ATCGCTTTGG TCGGTCAGTG GGCCGAACGG CGCGAGCTGC ACAACCGTAT TCAGGCCCTG
CAACAGGCAG CGCAGTCGAC CGTGCTTGGA CTGGGTGGCA TTGCCGCAAA ACATGGTTAT
CTGCCGTACG CGGCAACGCG CCACCCGGAT GTGCAGGCCT TGCTGAGGCA TCCTGCTGAC
CCCTTGCTGC GCGACCGGGT GAACCGCTAT CTGGCCGATT TCCAGACGCG TACCGATTCC
GCCGCGTTGT TCGTGATGAG TGTCGATGGC TTGACTTTGG CCGCCAGCAA CTGGAACAGC
GCCGGCAGCT TTGTCGGCCA ATCCTACCGC CAGCGTCCAT ATTTCAGGCA GGCCTTGCAA
GGCCGGCACA GCTATTTTTA CGGCGTCGGT CTGACCACCG GCACGCCGGG TTTTTTCATT
TCCGAACCGG TGCGCAGTGG CGACGAGGTG ATTGGCGTCA TGGTGATCAA GGTCAGCCTC
GATACGCTAG AGCACTCCTG GGCCGACAGC TCCGACCCGG TCGTGCTGCA AGACAGTCGC
GGCATTGTTT TCCTGAGTTC GGAGCCCGAG TGGCTGTATC GAAGCCGCGC GCCCCTCTCT
GCCGATGATC TGGCCTGGCT GGCCAAGAAC TGGCAATACG GCGAGCGCAC GGGTTACGAC
GTGCTGCCGT GGCGCGTGCT ACGCACGACG GGCTCGCCCG CTTACGAGCT GCACGCGGTC
GTCAAGGGAC AGTTGCGGTC ATTCCTGGCG CTGGAGAGCG TGCTGCCCGA ACTGGGCTGG
ACGCTGGTCG TCACCAGCGA TCTGAAGGGG GTGACACAAG CCCGGCGCGA GGCGCTGGTC
CTGGCCGCTT TGCTGGCTGC GGTGCTGCTG CTGGCGGGCC TGTACTGGCA ATTGCACGAG
CGCCGCTATT CCGAGCAGCG TCAGGCCAAG CTTGAACTGG AGCGCCGGGT GCAGGAGCGT
ACGCATGACC TGGAGCAGGC GCAGGCTTTC CGCAAGGCGA TGGAAGACGC GCTGCTGGTG
GGCATGCGTG CACGCGACCC GCAGGGACGT ATCAGTTATG TCAACCGTGC CTTTTGCGAC
ATGGTCGGCT ACCGCGACGA TGAATTGCTG GGCTGCGCGC CGCCCTATCC CTATTGGCAT
CCGGACGAGT TGGACAAATA CCGGCGCGAT CGCGAGGGCT CCATGGTGGC CGAGGCACAG
CCCTACGGAT TTGAATCGCG CATTCGCCAT CGCGACGGGC ATGACGTGAT CACCCGGGTT
TACACCGCGC CCCTTATCGA CGCCCAGGGC CAGAACCAGG GCTGGATGAG TTCAGTGGTC
GACATCACAG CGCAAAAACA GGCTGAGGAC CGCCAACACG ACCAGGAGCT CCAACTGCAG
CGCAGCGCAC GCCTGGCCAG CGTCGGCGAG ATGGCCTCCA CGCTGGCGCA TGAACTCAAT
CAACCGCTCA TGGCCTTGTC GAACTTCGCC CTGGCCGCGC GCAACATCGC CAGCCAGGCG
CAGATGGAAG TGCTGGTCTC GGCGCTGGAC GACATGGTCG AGCAGTCACA GCGCGCCAGC
GAGATCGTGC AGCGCGTGCG TGGGTTCATC AATCCGTCCC GTGGCAGCTA CGAAGCCTGT
GATGTGCATG CGGTGATTGC CCATTCGCTG GTTCTGCTCA AGTCCGAACT GGAGCGTCAG
GCGGTCACGG TGACGCGGCG TCTGGCCGAG CATATGCCGT CGGTGCGCGG CAATCGCGTG
CTGCTGGAGC AGGTGCTGAT CAATCTGTTA CAGAATGCGC TGCAGGCGAT GCAGGATCTG
CCAGCGGCCG AGCGCGTGAT CGACATCGAG ACGATGCTGC TCGGGCGTAC CGTCCAGATT
CGGGTCGGGG ACGCCGGCCC TGGCGTCCCC GAGGCTTTGC TCGCCCAGGT GTTCACGCCG
TTTTTCAGCA CCAAACCCGA AGGCTTGGGC CTGGGACTCA ATATCTGTCG CACCATCGTT
GAGGCCCACG GCGGTCACTT GACAGTGGCC AACCGCCTCG GCGGCGGCGC AGTGTTTGCC
TTTACCCTGG CGCTGAGCGT ATGA
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| Protein sequence | MPAYSLVAVK SLSLSLSLLR RLSWQRWLRW SLLALVTGVV IALVGQWAER RELHNRIQAL
QQAAQSTVLG LGGIAAKHGY LPYAATRHPD VQALLRHPAD PLLRDRVNRY LADFQTRTDS
AALFVMSVDG LTLAASNWNS AGSFVGQSYR QRPYFRQALQ GRHSYFYGVG LTTGTPGFFI
SEPVRSGDEV IGVMVIKVSL DTLEHSWADS SDPVVLQDSR GIVFLSSEPE WLYRSRAPLS
ADDLAWLAKN WQYGERTGYD VLPWRVLRTT GSPAYELHAV VKGQLRSFLA LESVLPELGW
TLVVTSDLKG VTQARREALV LAALLAAVLL LAGLYWQLHE RRYSEQRQAK LELERRVQER
THDLEQAQAF RKAMEDALLV GMRARDPQGR ISYVNRAFCD MVGYRDDELL GCAPPYPYWH
PDELDKYRRD REGSMVAEAQ PYGFESRIRH RDGHDVITRV YTAPLIDAQG QNQGWMSSVV
DITAQKQAED RQHDQELQLQ RSARLASVGE MASTLAHELN QPLMALSNFA LAARNIASQA
QMEVLVSALD DMVEQSQRAS EIVQRVRGFI NPSRGSYEAC DVHAVIAHSL VLLKSELERQ
AVTVTRRLAE HMPSVRGNRV LLEQVLINLL QNALQAMQDL PAAERVIDIE TMLLGRTVQI
RVGDAGPGVP EALLAQVFTP FFSTKPEGLG LGLNICRTIV EAHGGHLTVA NRLGGGAVFA
FTLALSV
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