Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0911 |
Symbol | |
ID | 3963627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 955014 |
End bp | 955778 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637915739 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_522190 |
Protein GI | 89899719 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAT CACCCTCCAT CGCTTTGGTC ACCGGCGGTA GCCGTGGTCT GGGCAAAAGC ACCGCACTCC ACCTGGCCAG GCAAGGCCAT GACGTCATCC TGACCTACCG TAGCAAACAG GCAGAAGCTA ACGATGTCGT CGCGCAAATT GAGGCCATGG GCCAAAAGGC GGTGGCGCTT GCGCTCAATG TTTCCGACAG CAGCAGCTTT GCAGGTTTTG CGGCCCAGGT GCGCGACGTG CTTCTTGCGC AAGGGGGCCG CACGACATTC AATGTACTGA TCAACAACGC AGGCACCGGC ACGCATGCAA GCCTGATGGA CACCACCGAG GTCCAGTTCG ATGAACTGGT CAACGTGCAC TTCAAGGGCG CCTTCTTTCT GACGCAAAAA CTGCTTCCCC TGATGGCAGA CGGCGGACGC ATCGTCAACC TGTCGTCCGG ACTGACGCGC TTTGCCTTGC CGGGCTACGC CGCATACGCC TCCATGAAAG GCGCAGTGGA AGTCATGACC CGTTACATGG CCAAGGAACT TGGGCCACGG GGTATTGCCG TCAACACGGT GGCACCCGGT GCCATTGCGA CCGATTTCGG TGGCGGCGCC GTGCGCGACA CTCCGCAACT CAATGCAATT GTCGCGTCAC AGACTGCGCT GGGTCGCGTA GGTGAAGCCG ACGACATCGG TGCCATGGTG GCCTCGTTGG TCTCACCTGC CAACCGTTGG ATCAATGCAC AGCGCATTGA AGTGTCGGGG GGGATGTTCG TTTGA
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Protein sequence | MQTSPSIALV TGGSRGLGKS TALHLARQGH DVILTYRSKQ AEANDVVAQI EAMGQKAVAL ALNVSDSSSF AGFAAQVRDV LLAQGGRTTF NVLINNAGTG THASLMDTTE VQFDELVNVH FKGAFFLTQK LLPLMADGGR IVNLSSGLTR FALPGYAAYA SMKGAVEVMT RYMAKELGPR GIAVNTVAPG AIATDFGGGA VRDTPQLNAI VASQTALGRV GEADDIGAMV ASLVSPANRW INAQRIEVSG GMFV
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